| Protein: | CYP40_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 361 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYP40_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..2] | [360..14] |
|
Region A: Residues: [1-361] |
1 11 21 31 41 51
| | | | | |
1 MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR 60
61 FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH ERKGMLSMAN SGPNTNGSQF 120
121 FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG 180
181 ICDFFKDGDV YPDWPIDLNE SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR 240
241 YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA 300
301 LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF 360
361 V
|
| Detection Method: |  |
| Confidence: | 78.0 |
| Match: | 1ihgA |
| Description: | Cyclophilin 40; Cyclophilin 40 isomerase domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 4.3775483906311 | bayes_pls_golite062009 |
| histone deacetylase activity | 4.29026678196473 | bayes_pls_golite062009 |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| deacetylase activity | 3.49940864924766 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.01511519120932 | bayes_pls_golite062009 |
| RNA binding | 2.94609837984526 | bayes_pls_golite062009 |
| signal sequence binding | 2.68460419248567 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.65866393331484 | bayes_pls_golite062009 |
| mRNA binding | 1.45537055700871 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| transcription regulator activity | 1.26149030245805 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 1.01220052237687 | bayes_pls_golite062009 |
| DNA binding | 0.9531600253493 | bayes_pls_golite062009 |
| nucleic acid binding | 0.939772862764466 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| hydrolase activity | 0.493806105600863 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.408539130322443 | bayes_pls_golite062009 |
| transcription factor activity | 0.374364600772076 | bayes_pls_golite062009 |
| drug binding | 0.36339132904137 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.322244688184474 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.286133802341887 | bayes_pls_golite062009 |
| histone binding | 0.268719695649015 | bayes_pls_golite062009 |
| protein binding | 0.230077752280113 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.105969834846946 | bayes_pls_golite062009 |
| receptor binding | 0.0640017685740477 | bayes_pls_golite062009 |
