| Protein: | MCM3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 776 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCM3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
584.0 | [0..1] | [776..1] |
|
Region A: Residues: [1-293] |
1 11 21 31 41 51
| | | | | |
1 MDVPEETRLR HKRDFIQFLD SMYMEEIKAL VHQKRHRLII NISDIHHHFR EVASRILKNP 60
61 NEYMQSFCDA ATEATRAIDP KYLKEGELVL VGFEGYFVSR VVTPRELLSD FIGSMVCVEG 120
121 IVTKCSLVRP KVVKSVHFCP STGEFTNRDY RDITSHAGLP TGSVYPTRDD KGNLLVTEYG 180
181 LCKYKDHQTL SIQEVPENAA PGQLPRSVDV IAEDDLVDSC KPGDRVSVFG IYKALPGKSK 240
241 GSVNGVFRTI LIANNIALLN KEANAPIYTK QDLDNIKNIA RRDDAFDLLA RSL
|
| Detection Method: |  |
| Confidence: | 45.045757 |
| Match: | 1ltlA |
| Description: | DNA replication initiator (cdc21/cdc54) N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 4.29626483284963 | bayes_pls_golite062009 |
| DNA binding | 3.71771169141041 | bayes_pls_golite062009 |
| structure-specific DNA binding | 3.48139490984491 | bayes_pls_golite062009 |
| single-stranded DNA binding | 3.43027351695641 | bayes_pls_golite062009 |
| binding | 2.83465364476231 | bayes_pls_golite062009 |
| telomerase inhibitor activity | 2.77979101622935 | bayes_pls_golite062009 |
| telomeric DNA binding | 2.51555240517937 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 2.42617682290608 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.13063800565247 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10110937001387 | bayes_pls_golite062009 |
| structural molecule activity | 1.9177190829469 | bayes_pls_golite062009 |
| DNA replication origin binding | 1.84819558112187 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 1.19766815287926 | bayes_pls_golite062009 |
| RNA polymerase activity | 1.19766815287926 | bayes_pls_golite062009 |
| ribonuclease activity | 1.19236946227657 | bayes_pls_golite062009 |
| transcription factor activity | 1.14242112812892 | bayes_pls_golite062009 |
| DNA helicase activity | 1.12203697857261 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.85691075793641 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.638831894247026 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.635129001787169 | bayes_pls_golite062009 |
| nuclease activity | 0.57381531077345 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.325774164899685 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.31769813397725 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.314881439089948 | bayes_pls_golite062009 |
| translation regulator activity | 0.31332179848255 | bayes_pls_golite062009 |
| exonuclease activity | 0.28313884527829 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.263197317040851 | bayes_pls_golite062009 |
| transferase activity | 0.249054945579328 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.2080607201312 | bayes_pls_golite062009 |
| RNA binding | 0.18502033889261 | bayes_pls_golite062009 |
| protein binding | 0.152645195799531 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.125256208482441 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.109774918833391 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.0954216620147701 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.0179535526984695 | bayes_pls_golite062009 |
| helicase activity | 0.0121541775159524 | bayes_pls_golite062009 |
|
Region A: Residues: [294-776] |
1 11 21 31 41 51
| | | | | |
1 APSIYGHAWI KKAVVLLMLG GVEKNLKNGT HLRGDINMMM VGDPSVAKSQ LLRAIMNIAP 60
61 LAISTTGRGS SGVGLTAAVT SDQETGERRL EAGAMVLADK GIVCIDEFDK MNDQDRVAIH 120
121 EVMEQQTVTI AKAGIHASLN ARCSVVAAAN PIYGTYDRSL TPTKNIGLPD SLLSRFDLLF 180
181 IVLDQMDAGI DSMISEHVLR MHRYKNDRGE AGPDGSLPYA REDNAESEMF VKYNQTLHGK 240
241 KKRGQTHDKT LTIKFLKKYI HYAKHRITPK LTDEASERIA EAYADLRNAG SDTKTGGTLP 300
301 ITARTLETII RLATAHAKMK LSSEVTKADA EAALKLMNFA IYHQELTEMD DREQEERQRE 360
361 QAEQERTPSG RRGNQRRNNE DGAENDTANV DSETADPMEV DEPSVEQFSG TVSAARIETF 420
421 ERVFGQHMRT HRLDDISIAD IETVVNNNGV GASRYSADEI MALLEKLQDD NKVMISDGKV 480
481 HII
|
| Detection Method: | |
| Confidence: | 75.69897 |
| Match: | 2dhrA |
| Description: | No description for 2dhrA was found. |
