| Protein: | gi|5732432, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 625 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5732432, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..5] | [618..3] |
|
Region A: Residues: [1-283] |
1 11 21 31 41 51
| | | | | |
1 MISTMYSEET SERSSFPSKR HLEDRTENRE EHSKRLRPTS FRDQKVTIPQ GWLDCPRFGQ 60
61 HIGLIIPSKV PLSESYNDCV PSGKRYNFKQ WLTKIGLVID LTNTTRYYHP NTELRQNRIE 120
121 YVKIRCSGRD SVPDNVSVNT FVHEVTQFEN HNLSEKYLLV HCTHGHNRTG FMIVHYLMRS 180
181 RPMMSVTQAL KIFSDARPPG IYKPDYIDAL YRFYHEVKPG SVICPPTPEW KRSEEAKFDD 240
241 DDNALSYREV QGNNQEENVQ LSNDDVLGDE IPYDQEVSYQ NSI
|
| Detection Method: |  |
| Confidence: | 23.522879 |
| Match: | 2c46A |
| Description: | CRYSTAL STRUCTURE OF THE HUMAN RNA guanylyltransferase and 5'- phosphatase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [284-349] |
1 11 21 31 41 51
| | | | | |
1 NHMLNISMQF PGSHPLSLGR EALQLLRQRY YYATWKADGT RYMMLLTRDG CYLVNREYRF 60
61 RRVQMR
|
| Detection Method: | |
| Confidence: | 9.39794 |
| Match: | 1xk5A |
| Description: | Crystal structure of the m3G-cap-binding domain of snurportin1 in complex with a m3GpppG-cap dinucleotide |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [350-625] |
1 11 21 31 41 51
| | | | | |
1 FPCEYEPSDY KVHHYTLLDG EMVVDTIKEG ETQRHVRRYL VYDLVAINGQ FVAERPFSER 60
61 WNILERELIK PRNDEKKVRD HWYRYDKEPF GVRIKAFCLL SAVEKKVFNE LIPLLSHESD 120
121 GLIFQGWDNP YVFGPNKDLL KWKFVETLDF LFDMDKYGRQ MLFLQERGRM KLMEGFAVEF 180
181 RGDGWDNDLA SYCGKIVECS WDKEKKVWVS LRIRVDKSKP NGIGTGRSVI KCIEDDLTKE 240
241 VLLKEIKEII LLPMYVERIE NDTKEAARRK HGNRKG
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 1p16A |
| Description: | mRNA capping enzyme alpha subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| mRNA guanylyltransferase activity | 8.90512192081791 | bayes_pls_golite062009 |
| RNA guanylyltransferase activity | 8.46124967325993 | bayes_pls_golite062009 |
| guanylyltransferase activity | 5.45528434251369 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 3.08627215479695 | bayes_pls_golite062009 |
| ligase activity, forming phosphoric ester bonds | 2.90848936326491 | bayes_pls_golite062009 |
| DNA ligase activity | 2.88630907730339 | bayes_pls_golite062009 |
| ligase activity | 2.7348192562888 | bayes_pls_golite062009 |
| RNA binding | 2.41160981373213 | bayes_pls_golite062009 |
| hydrolase activity | 2.27001407788735 | bayes_pls_golite062009 |
| catalytic activity | 2.15370807854636 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.81524862921454 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.6315894906264 | bayes_pls_golite062009 |
| binding | 1.63149986094272 | bayes_pls_golite062009 |
| single-stranded DNA binding | 1.62996999055328 | bayes_pls_golite062009 |
| 1.5765009871268 | bayes_pls_golite062009 | |
| nucleic acid binding | 1.39097817404242 | bayes_pls_golite062009 |
| DNA binding | 1.33524321669723 | bayes_pls_golite062009 |
| structural molecule activity | 1.32534541097134 | bayes_pls_golite062009 |
| ribonuclease activity | 1.19236946227657 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.15212468568198 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.10445667068538 | bayes_pls_golite062009 |
| DNA ligase (ATP) activity | 1.02324195596817 | bayes_pls_golite062009 |
| transcription regulator activity | 0.996884322431837 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.83268201349295 | bayes_pls_golite062009 |
| translation regulator activity | 0.613904794456162 | bayes_pls_golite062009 |
| nuclease activity | 0.57381531077345 | bayes_pls_golite062009 |
| DNA ligase (NAD+) activity | 0.571203360462711 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.566068090112017 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.477127926059749 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.477127926059749 | bayes_pls_golite062009 |
| mRNA binding | 0.4162128308402 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.32084431704638 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.30211828233765 | bayes_pls_golite062009 |
| transcription factor activity | 0.298729064067577 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.287720615514972 | bayes_pls_golite062009 |
| protein binding | 0.229784545879049 | bayes_pls_golite062009 |
| ATP binding | 0.17947590671995 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.148991737494582 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.138964074823321 | bayes_pls_golite062009 |
