| Protein: | GLR28_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 947 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLR28_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
630.0 | [0..1] | [947..1] |
|
Region A: Residues: [1-525] |
1 11 21 31 41 51
| | | | | |
1 MNPKKNNNTF LSYFVCLFLL LEVGLGQNQI SEIKVGVVLD LNTTFSKICL TSINLALSDF 60
61 YKDHPNYRTR LALHVRDSMK DTVQASAAAL DLIQNEQVSA IIGPIDSMQA KFMIKLANKT 120
121 QVPTISFSAT SPLLTSIKSD YFVRGTIDDS YQVKAIAAIF ESFGWRSVVA IYVDNELGEG 180
181 IMPYLFDALQ DVQVDRSVIP SEANDDQILK ELYKLMTRQT RVFVVHMASR LASRIFEKAT 240
241 EIGMMEEGYV WLMTNGMTHM MRHIHHGRSL NTIDGVLGVR SHVPKSKGLE DFRLRWKRNF 300
301 KKENPWLRDD LSIFGLWAYD STTALAMAVE KTNISSFPYN NASGSSNNMT DLGTLHVSRY 360
361 GPSLLEALSE IRFNGLAGRF NLIDRQLESP KFEIINFVGN EERIVGFWTP SNGLVNVNSN 420
421 KTTSFTGERF GPLIWPGKST IVPKGWEIPT NGKKIKVGVP VKKGFFNFVE VITDPITNIT 480
481 TPKGYAIDIF EAALKKLPYS VIPQYYRFES PDDDYDDLVY KVDNG
|
| Detection Method: |  |
| Confidence: | 48.69897 |
| Match: | 2e4uA |
| Description: | No description for 2e4uA was found. |
|
Region A: Residues: [526-604] |
1 11 21 31 41 51
| | | | | |
1 TLDAVVGDVT ITAYRSLYAD FTLPYTESGV SMMVPVRDNE NKNTWVFLKP WGLDLWVTTA 60
61 CFFVLIGFVV WLFEHRVNT
|
| Detection Method: | |
| Confidence: | 2.29 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [605-795] |
1 11 21 31 41 51
| | | | | |
1 DFRGPPHHQI GTSFWFSFST MVFAHREKVV SNLARFVVVV WCFVVLVLTQ SYTANLTSFL 60
61 TVQRFQPAAI NVKDLIKNGD YVGYQHGAFV KDFLIKEGFN VSKLKPFGSS EECHALLSNG 120
121 SISAAFDEVA YLRAILSQYC SKYAIVEPTF KTAGFGFAFP RNSPLTGDVS KAILNVTQGD 180
181 EMQHIENKWF M
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1gggA |
| Description: | Glutamine-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| amine binding | 4.11747486942823 | bayes_pls_golite062009 |
| transporter activity | 3.92658561501282 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.71430307970333 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.34421502810243 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 3.33883206510679 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 3.33572158012752 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 3.31947078781945 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 3.3164655425684 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 3.3159417475856 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 3.25041295044206 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.76254706952599 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.65558937563899 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.36995601057551 | bayes_pls_golite062009 |
| ATPase activity | 2.35388655037218 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.29319753274625 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.27317031628667 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.27090852909065 | bayes_pls_golite062009 |
| peptide binding | 2.13614935733644 | bayes_pls_golite062009 |
| binding | 1.99193554770277 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.84929214408108 | bayes_pls_golite062009 |
| receptor activity | 1.74349172783363 | bayes_pls_golite062009 |
| molecular transducer activity | 1.44487216360172 | bayes_pls_golite062009 |
| signal transducer activity | 1.44487216360172 | bayes_pls_golite062009 |
| hydrolase activity | 0.999095648881488 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 0.88623763826001 | bayes_pls_golite062009 |
| transcription regulator activity | 0.810341130332095 | bayes_pls_golite062009 |
| protein binding | 0.782435650956845 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 0.75669016367838 | bayes_pls_golite062009 |
| catalytic activity | 0.674312982669564 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.644907195402529 | bayes_pls_golite062009 |
| transcription factor activity | 0.612192824804611 | bayes_pls_golite062009 |
| DNA binding | 0.596947798194569 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 0.555351218220589 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 0.372828805396439 | bayes_pls_golite062009 |
| nucleic acid binding | 0.367839087542125 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.343508026849565 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 0.149393758153546 | bayes_pls_golite062009 |
|
Region A: Residues: [796-947] |
1 11 21 31 41 51
| | | | | |
1 KQNDCPDPKT ALSSNRLSLR SFWGLFLIAG IASFLALLIF VFLFLYENRH TLCDDSEDSI 60
61 WRKLTSLFRN FDEKDIKSHT FKSSAVHHVS SPMTQYIPSP STLQIAPRPH SPSQDRAFEL 120
121 RRVSFTPNEE RLTTQTIHFE DEESDIECVV EQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
