| Protein: | CSN1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 441 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..1] | [441..1] |
|
Region A: Residues: [1-316] |
1 11 21 31 41 51
| | | | | |
1 MERDEEASGP MMEMCTNGGE ETSNRRPIIS GEPLDIEAYA ALYKGRTKIM RLLFIANHCG 60
61 GNHALQFDAL RMAYDEIKKG ENTQLFREVV NKIGNRLGEK YGMDLAWCEA VDRRAEQKKV 120
121 KLENELSSYR TNLIKESIRM GYNDFGDFYY ACGMLGDAFK NYIRTRDYCT TTKHIIHMCM 180
181 NAILVSIEMG QFTHVTSYVN KAEQNPETLE PMVNAKLRCA SGLAHLELKK YKLAARKFLD 240
241 VNPELGNSYN EVIAPQDIAT YGGLCALASF DRSELKQKVI DNINFRNFLE LVPDVRELIN 300
301 DFYSSRYASC LEYLAS
|
| Detection Method: |  |
| Confidence: | 3.08 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
|
Region A: Residues: [317-441] |
1 11 21 31 41 51
| | | | | |
1 LKSNLLLDIH LHDHVDTLYD QIRKKALIQY TLPFVSVDLS RMADAFKTSV SGLEKELEAL 60
61 ITDNQIQARI DSHNKILYAR HADQRNATFQ KVLQMGNEFD RDVRAMLLRA NLLKHEYHAR 120
121 SARKL
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.29569167054278 | bayes_pls_golite062009 |
| DNA binding | 4.90756541371868 | bayes_pls_golite062009 |
| nucleic acid binding | 4.69183445184264 | bayes_pls_golite062009 |
| transcription factor activity | 4.14166958134441 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.48053910222825 | bayes_pls_golite062009 |
| transcription activator activity | 2.29614125067822 | bayes_pls_golite062009 |
| transcription repressor activity | 2.19033875364989 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.48055533524841 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.33374581364046 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.27763700765562 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.12147035668008 | bayes_pls_golite062009 |
| transcription factor binding | 0.83705247708153 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.754042916649094 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.657984195080457 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.486434906547244 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.286130392009263 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
