| Protein: | cul-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 791 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cul-2.
| Description | E-value | Query Range |
Subject Range |
|
|
739.0 | [0..8] | [791..205] |
|
Region A: Residues: [1-791] |
1 11 21 31 41 51
| | | | | |
1 MASSTKVSLR RPPRPQVMYS LKPKVVEFDK VWVQLRPSII DIINLRPITN VQWHHKFSDV 60
61 YDICVSIPTP LSERLYNEVK ACIQEHVRQK RQDIVDVDPD LLLQEYHKMW RVFHEGAIFI 120
121 HRLFGYLNKQ FVKQKRCTDL DNFAQYAAFL QIPDVKEIGC LALEIWKEDL VKTILPQLVK 180
181 LLLIAIDNDR KGNFPHIANE VSGVINSFVK MEETDFDVVP AEGARYKARE STTAFYQESF 240
241 EKPLLTDTEQ YYSALAQKML TDLSCSEYME QVIVLLEQEE MRAKKYLHES SVEKVITLCQ 300
301 KVMIKAHKDK LHAVCHDLIT NEENKDLRNM YRLLKPIQAG LSVMVKEFEE YVKKKGLEAV 360
361 SRLTGENVPQ QFVENVLRVY NKFNDMKTAV FMDDGEFSSG LDKALQGVVN SKEPGQSVPK 420
421 ASERLARYTD GLLKKSTKGL SETDLEAKLD SAIVIFRYIE DKDIFQKFYS KMLANRLIAS 480
481 TSISMDAEEL MINKLKQACG YEFTSKLSRM FTDIGLSQEL SNNFDKHIAD IKTVQPDVKF 540
541 VPTQTMILQA GSWPLNAPQL STNSNNQTAQ DVANFHLPRI LQPVIQEFEK FYTGKHNGRK 600
601 LTWLFNMSQG DVRLTYLDKQ YVAQMYVYQM AALLCFERRD AILVKDIGEE IGVSGDYLLK 660
661 TIRTILDVTL LTCDDQNLTA DSLVRLNMSM TSKRMKFRLQ APQVNKAVEK EQEAVANTVS 720
721 QDRKYYMECA IVRIMKTRKV LKHNALVTEI MDQTKGRFSP DVPFIKKSIE DLIEKMYIQR 780
781 TDQNDEYQYL A
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1u6gA |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 9.95820721075934 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 9.63704265478699 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.59660059921406 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 7.32718329074249 | bayes_pls_golite062009 |
| vasopressin activated calcium mobilizing receptor activity | 6.69190468636718 | bayes_pls_golite062009 |
| transcription regulator activity | 4.76121492612224 | bayes_pls_golite062009 |
| ligase activity | 4.08678005991666 | bayes_pls_golite062009 |
| transcription factor activity | 3.7855017556511 | bayes_pls_golite062009 |
| binding | 2.45185337633142 | bayes_pls_golite062009 |
| transcription repressor activity | 2.39237599101586 | bayes_pls_golite062009 |
| protein binding | 2.34145982999922 | bayes_pls_golite062009 |
| transcription activator activity | 2.05043065144612 | bayes_pls_golite062009 |
| nucleic acid binding | 1.54797684894025 | bayes_pls_golite062009 |
| DNA binding | 1.42215436462553 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.23862224095769 | bayes_pls_golite062009 |
| transporter activity | 0.891050405674973 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.648150681919233 | bayes_pls_golite062009 |
| transcription factor binding | 0.612315945412079 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.368917395770011 | bayes_pls_golite062009 |
| catalytic activity | 0.351553138703956 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.146182977030285 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.117670813298683 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.107671044044222 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0102780098866235 | bayes_pls_golite062009 |
