| Protein: | cul-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 780 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cul-1.
| Description | E-value | Query Range |
Subject Range |
|
|
788.0 | [0..2] | [780..212] |
|
Region A: Residues: [1-780] |
1 11 21 31 41 51
| | | | | |
1 MTNSEPRRMT CDSEVVWKKL QDGLDVAYRR ENMAPKDYMT LYTSVYDYCT SITLSTSRRD 60
61 GEDGRAESST PARTAGADFV GHEMYQRVEE YVKAYVIAVC EKGAELSGED LLKYYTTEWE 120
121 NFRISSKVMD GIFAYLNRHW IRRELDEGHE NIYMVYTLAL VVWKRNLFND LKDKVIDAML 180
181 ELIRSERTGS MINSRYISGV VECLVELGVD DSETDAKKDA ETKKLAVYKE FFEVKFLEAT 240
241 RGFYTQEAAN FLSNGGNVTD YMIKVETRLN QEDDRCQLYL NSSTKTPLAT CCESVLISNQ 300
301 LDFLQRHFGG LLVDKRDDDL SRMFKLCDRV PNGLDELRKS LENHIAKEGH QALERVAMEA 360
361 ATDAKLYVKT LLEVHERYQS LVNRSFKNEP GFMQSLDKAA TSFINNNAVT KRAPPQAQLT 420
421 KSAELLARYC DQLLRKSSKM PDEAELEELQ TKIMVVFKYI DDKDVFSKFY TKMFSKRLIS 480
481 ELSASDEAEA NFITKLKSMC GYEYTARLSK MVNDTQVSKD LTADFKEKKA DMLGQKSVEF 540
541 NVLVLSSGSW PTFPTTPITL PQQLSKTIEI FGQFYNEKFN GRRLTWVYSQ SRGEITSTAF 600
601 PKKYVFTATT AQMCTMLLFN EQDSYTVEQI AAATKMDEKS APAIVGSLIK NLVLKADTEL 660
661 QKEDEVPMTA TVSLNKAYMN KKVRVDLSKF TMKQDAVRDT ENVQKNVEED RKSVISACIV 720
721 RIMKTRKRVQ HQQLMTEVIT QLSGRFKPKV EMIKRCIGSL IEKEYMLRTE GQKDLYEYLA 780
781
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1u6gA |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 9.95820721075934 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 9.63704265478699 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.59660059921406 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 7.32718329074249 | bayes_pls_golite062009 |
| vasopressin activated calcium mobilizing receptor activity | 6.69190468636718 | bayes_pls_golite062009 |
| transcription regulator activity | 4.76121492612224 | bayes_pls_golite062009 |
| ligase activity | 4.08678005991666 | bayes_pls_golite062009 |
| transcription factor activity | 3.7855017556511 | bayes_pls_golite062009 |
| binding | 2.45185337633142 | bayes_pls_golite062009 |
| transcription repressor activity | 2.39237599101586 | bayes_pls_golite062009 |
| protein binding | 2.34145982999922 | bayes_pls_golite062009 |
| transcription activator activity | 2.05043065144612 | bayes_pls_golite062009 |
| nucleic acid binding | 1.54797684894025 | bayes_pls_golite062009 |
| DNA binding | 1.42215436462553 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.23862224095769 | bayes_pls_golite062009 |
| transporter activity | 0.891050405674973 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.648150681919233 | bayes_pls_golite062009 |
| transcription factor binding | 0.612315945412079 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.368917395770011 | bayes_pls_golite062009 |
| catalytic activity | 0.351553138703956 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.146182977030285 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.117670813298683 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.107671044044222 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0102780098866235 | bayes_pls_golite062009 |
