| Protein: | dkf-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 722 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dkf-1.
| Description | E-value | Query Range |
Subject Range |
|
|
486.0 | [0..63] | [720..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MDGSQGSTDY GDHVVLRYGG TREMVPLIRH EQMLDMLMER ARQIVQGFGN LDTRNMYLFR 60
61 HEYNSPTLLY PITSASQITS
|
| Detection Method: |  |
| Confidence: | 11.522879 |
| Match: | 1rrbA |
| Description: | THE RAS-BINDING DOMAIN OF RAF-1 FROM RAT, NMR, 1 STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.35732272412639 | bayes_pls_golite062009 |
| tubulin binding | 2.17448062213288 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.10724980780815 | bayes_pls_golite062009 |
| microtubule binding | 1.93078273560396 | bayes_pls_golite062009 |
| protein binding | 1.86841453215444 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.63853240069891 | bayes_pls_golite062009 |
| kinase activity | 1.62384132584197 | bayes_pls_golite062009 |
| protein kinase activity | 1.5956463895254 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.51475136357956 | bayes_pls_golite062009 |
| molecular transducer activity | 1.50825759862682 | bayes_pls_golite062009 |
| signal transducer activity | 1.50825759862682 | bayes_pls_golite062009 |
| transferase activity | 1.25776281736571 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.673589832597734 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.599634454232833 | bayes_pls_golite062009 |
| structural molecule activity | 0.576819726104993 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.562594294957137 | bayes_pls_golite062009 |
| transcription regulator activity | 0.546422207034767 | bayes_pls_golite062009 |
| nucleic acid binding | 0.525788464472489 | bayes_pls_golite062009 |
| DNA binding | 0.422142077605877 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.334601927012824 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.315664702789604 | bayes_pls_golite062009 |
| receptor binding | 0.298046142314417 | bayes_pls_golite062009 |
| enzyme binding | 0.240262781026149 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.162163146322721 | bayes_pls_golite062009 |
| protein tag | 0.00311613478935058 | bayes_pls_golite062009 |
|
Region A: Residues: [81-241] |
1 11 21 31 41 51
| | | | | |
1 GSILEIILVD RTEAAVIPHV VEPESYMRPT FCDFCGEMLT GLMRQGVKCK NCNGNFHKRC 60
61 SNAARNNCGA PGAPGAQPSR PPILPPIPTT PTGFPVAALS TPTGLPHTLI EHSYRQFTVC 120
121 KVCDHLLVGL VKQGLKCRDC GVNVHRKCAM ELASNCVLSE N
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1xa6A |
| Description: | Crystal Structure of the Human Beta2-Chimaerin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| diacylglycerol kinase activity | 2.62274004397594 | bayes_pls_golite062009 |
| binding | 2.36195429973813 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.12546774457691 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 2.10625597744594 | bayes_pls_golite062009 |
| kinase activity | 2.03632850156074 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.8531437045627 | bayes_pls_golite062009 |
| protein kinase activity | 1.80739081420522 | bayes_pls_golite062009 |
| molecular transducer activity | 1.70650638346167 | bayes_pls_golite062009 |
| signal transducer activity | 1.70650638346167 | bayes_pls_golite062009 |
| transferase activity | 1.4550521488922 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.39167263636091 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.37139209958305 | bayes_pls_golite062009 |
| protein binding | 1.29100556128076 | bayes_pls_golite062009 |
| transcription regulator activity | 1.19392095748004 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.956859696337723 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.911061212692491 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.907368864863833 | bayes_pls_golite062009 |
| nucleic acid binding | 0.746688776397071 | bayes_pls_golite062009 |
| small GTPase regulator activity | 0.661240850692236 | bayes_pls_golite062009 |
| DNA binding | 0.618071969351071 | bayes_pls_golite062009 |
| kinase binding | 0.494958567742569 | bayes_pls_golite062009 |
| catalytic activity | 0.194464246602439 | bayes_pls_golite062009 |
| transcription factor activity | 0.0701429188109299 | bayes_pls_golite062009 |
|
Region A: Residues: [242-411] |
1 11 21 31 41 51
| | | | | |
1 AISRVNFTDP EGPGSSSSDN IPLFRLPGQV GTRATEKKKL EGWMMHFILS DPERRLKHYW 60
61 MMQSNAIHLY NEYSEGIGVN PNRVYRIIPL AEITSVVQNN GKSVLAKHPP HCFEIRTTTN 120
121 TVFCVGEDYH AFSGGPPKKI PRSMSVRPSS NTTMWFQFIK ESLQPPSRNE
|
| Detection Method: | |
| Confidence: | 3.04 |
| Match: | 2coaA |
| Description: | Solution structure of the PH domain of protein kinase C, D2 type from human |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.73312450062269 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.35640415776708 | bayes_pls_golite062009 |
| actin binding | 2.15139219039706 | bayes_pls_golite062009 |
| signal transducer activity | 1.97025592796299 | bayes_pls_golite062009 |
| molecular transducer activity | 1.97025592796299 | bayes_pls_golite062009 |
| protein binding | 1.95763087285706 | bayes_pls_golite062009 |
| receptor activity | 1.7532159500599 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.72393003840462 | bayes_pls_golite062009 |
| phosphoinositide 3-kinase binding | 1.71957805451003 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.55414958698765 | bayes_pls_golite062009 |
| protein kinase activity | 1.53914015577029 | bayes_pls_golite062009 |
| kinase activity | 1.52393509273639 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.39413069155432 | bayes_pls_golite062009 |
| transporter activity | 1.29925758003665 | bayes_pls_golite062009 |
| insulin receptor binding | 1.24159469960645 | bayes_pls_golite062009 |
| receptor binding | 1.17585427851367 | bayes_pls_golite062009 |
| transferase activity | 1.09391396934652 | bayes_pls_golite062009 |
| enzyme binding | 0.986198119454688 | bayes_pls_golite062009 |
| insulin-like growth factor receptor binding | 0.902696448574164 | bayes_pls_golite062009 |
| receptor signaling protein activity | 0.830314446783898 | bayes_pls_golite062009 |
| kinase binding | 0.829679711601002 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.807688160227952 | bayes_pls_golite062009 |
| SH2 domain binding | 0.77769334991472 | bayes_pls_golite062009 |
| protein domain specific binding | 0.650240628628722 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.62326150960884 | bayes_pls_golite062009 |
| protein kinase binding | 0.557283580441975 | bayes_pls_golite062009 |
| actin filament binding | 0.516969879010319 | bayes_pls_golite062009 |
| transcription regulator activity | 0.462744818503729 | bayes_pls_golite062009 |
| protein complex binding | 0.424439033593144 | bayes_pls_golite062009 |
| nucleic acid binding | 0.42289557002454 | bayes_pls_golite062009 |
| DNA binding | 0.362931880290478 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.358136502761366 | bayes_pls_golite062009 |
| structural molecule activity | 0.332112521019418 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.191468082618045 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.183587483764957 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.174772802535455 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.0687306550834211 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0123738509852108 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0042696817373139 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.00109440156897189 | bayes_pls_golite062009 |
|
Region A: Residues: [412-722] |
1 11 21 31 41 51
| | | | | |
1 DNAEQALEFA NLYQVLSDKT LGSGQFGTVY SAIQRHSGKE VAVKVISKER FSKKGSGAES 60
61 MRAEVAILQQ TCHPGIVCLE FMCETKDKIF VVMEKMNGDM LEMILSQELG RLNSRATKFL 120
121 LVQILCALKY LHDQGIAHCD LKPENVLLSD MGSNFPQTKI CDFGYARFIP ESQFRKTVVG 180
181 TPAYLPPEVL QRKGYNKSLD MWSVGVIIYV TLSGTFPFNE GEEISEQIQN ASFMFPTEPW 240
241 SEVEPLAVDL IQKLLKVEIE ARMSIEQCLD HGWLKGEQLY RDLRDLEVRL NTPRYLTSPQ 300
301 DDILYGTLVN P
|
| Detection Method: | |
| Confidence: | 64.30103 |
| Match: | 2cn5A |
| Description: | No description for 2cn5A was found. |
