| Protein: | ubc-20 |
| Organism: | Caenorhabditis elegans |
| Length: | 199 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ubc-20.
| Description | E-value | Query Range |
Subject Range |
|
|
215.0 | [0..1] | [199..1] |
|
|
211.0 | [0..2] | [154..2] |
|
|
210.0 | [0..4] | [154..1] |
|
|
209.0 | [0..4] | [154..1] |
|
|
209.0 | [0..6] | [199..1] |
|
|
209.0 | [0..4] | [154..1] |
|
|
208.0 | [0..4] | [154..1] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MSNIAFNRLQ RECKEVVTNS EISETGIMIE ILNENLTEIK GHIRGPPDTP YAGGMFDLDI 60
61 KIPDQYPFSP PNVKFSTKIW HPNVSSQTGV ICLDILKDQW AASLTLRTVL LSIQALMCTP 120
121 EPKDPQDAVV AKQYMEKPAV FKATAEYWTT KFAKGAVKNA GYQALVDKLK DMGVREEEAV 180
181 SVLSCNNWDI NRSTVYIFS
|
| Detection Method: |  |
| Confidence: | 52.69897 |
| Match: | 1ylaA |
| Description: | Ubiquitin-conjugating enzyme E2-25 kDa (Huntington interacting protein 2) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 11.3486134076304 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 11.2964721480824 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 10.2401422444624 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 8.93602533934698 | bayes_pls_golite062009 |
| HLH domain binding | 8.10904818707269 | bayes_pls_golite062009 |
| ligase activity | 5.17219147802758 | bayes_pls_golite062009 |
| peptidase activity | 4.11397638448668 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.93085931991298 | bayes_pls_golite062009 |
| SUMO ligase activity | 3.88357560284404 | bayes_pls_golite062009 |
| hydrolase activity | 2.88846002372004 | bayes_pls_golite062009 |
| transcription regulator activity | 2.21355731489173 | bayes_pls_golite062009 |
| nucleic acid binding | 2.13970605403492 | bayes_pls_golite062009 |
| SH2 domain binding | 2.03311435063068 | bayes_pls_golite062009 |
| DNA binding | 1.95596447916631 | bayes_pls_golite062009 |
| protein binding | 1.77678273247394 | bayes_pls_golite062009 |
| binding | 1.75350658654805 | bayes_pls_golite062009 |
| transcription repressor activity | 1.5236035191291 | bayes_pls_golite062009 |
| transcription activator activity | 1.19240180311941 | bayes_pls_golite062009 |
| catalytic activity | 0.891402822028799 | bayes_pls_golite062009 |
| NEDD8 ligase activity | 0.715654744941217 | bayes_pls_golite062009 |
| damaged DNA binding | 0.68887454730296 | bayes_pls_golite062009 |
| kinase binding | 0.643955694307168 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.59805675560068 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.58835335751383 | bayes_pls_golite062009 |
| kinase activity | 0.519703305315987 | bayes_pls_golite062009 |
| protein kinase activity | 0.443948654247666 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.387487703339719 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.373779304908933 | bayes_pls_golite062009 |
| protein kinase binding | 0.235250314885345 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.182854082413338 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.122859425935324 | bayes_pls_golite062009 |
| transferase activity | 0.0984525836903841 | bayes_pls_golite062009 |
| transcription factor binding | 0.0104967529560147 | bayes_pls_golite062009 |
