| Protein: | ima-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 531 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ima-2.
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..13] | [531..5] |
|
Region A: Residues: [1-531] |
1 11 21 31 41 51
| | | | | |
1 MTLTETSLSH NAEEGKDEGG RLQQYKNLTK HEELRRRRTE CSVEIRKQKG ADMMMKRRNI 60
61 VDVDEGGNSE SELEEPEKIS HQQSSTRLSN DEIRAILSNN PSEDDMVRCF ESLRKSLSKT 120
121 KNPPIDEVIH CGLLQALVQA LSVENERVQY EAAWALTNIV SGSTEQTIAA VEAGVTIPLI 180
181 HLSVHQSAQI SEQALWAVAN IAGDSSQLRD YVIKCHGVEA LMHLMEKVDQ LGDSHVRTIA 240
241 WAFSNMCRHK NPHAPLEVLR VLSKGLVKLV QHTDRQVRQD ACWAVSYLTD GPDEQIELAR 300
301 ESGVLPHVVA FFKEAENLVA PALRTLGNVA TGNDSLTQAV IDLGSLDEIL PLMEKTRSSS 360
361 IVKECCWLVS NIIAGTQKQI QAVLDANLLP VLINVLKSGD HKCQFEASWA LSNLAQGGTN 420
421 RQVVAMLEDN VVPALCQALL QTNTDMLNNT LETLYTLMLT VQNGYPHKVD ILHDQVEENG 480
481 GLDSLERLQE SQSEQIYTQA YRIITQFFTD DDAGEKESHE NADPQDNKWS F
|
| Detection Method: |  |
| Confidence: | 96.522879 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 3.48172991171337 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| actin binding | 2.8014924948341 | bayes_pls_golite062009 |
| nucleic acid binding | 2.74745843355294 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.61566088685247 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| transcription regulator activity | 2.16673352512615 | bayes_pls_golite062009 |
| DNA binding | 1.95242774903625 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| molecular transducer activity | 1.32874350341969 | bayes_pls_golite062009 |
| signal transducer activity | 1.32874350341969 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| transcription factor activity | 1.20660383756339 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| RNA binding | 0.40024158562931 | bayes_pls_golite062009 |
| structural molecule activity | 0.279926218252647 | bayes_pls_golite062009 |
| importin-alpha export receptor activity | 0.259676026705859 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| transcription activator activity | 0.160275383613705 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
| transcription factor binding | 0.0221966060394205 | bayes_pls_golite062009 |
