| Protein: | ech-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 385 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ech-4.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..25] | [385..307] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MLRNLTLAAR SVLYNPQVSV RSFSAQADFE KAQKNLKTLK EEPDNDVKLQ LYGLFKQATA 60
61 GDVQGKRPGM MDFVGRAKYD AWNTLKGQTQ DEARANYAKL VGGLISEEA
|
| Detection Method: |  |
| Confidence: | 23.69897 |
| Match: | 2cquA |
| Description: | Solution Structure of RSGI RUH-045, a Human Acyl-CoA Binding Protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [110-385] |
1 11 21 31 41 51
| | | | | |
1 SAAPEPTGPS IEGLENVDGL SVTREGKVFK IALNRPKKFN ALTLEMYQGI QKALEVSNND 60
61 KSTSITVITA NGSYYCAGND LTNFKAAAGG TKEQIADMAN TAKVIMKDYV NAYINHEKPL 120
121 IALINGPAVG IAVTVLGMFD YVIATDKASF HTPFAPLGQS PEGVSSYTFP LIMGSLRASE 180
181 MLLVCKKISA QTAKDYGLVN EVVPDAEFQS HAQKTVEAFS QLPPETLRIN KKLLRSLHKE 240
241 KLLEVNNIEA DQICERWQSK ECHQAIAAFM TKGAKK
|
| Detection Method: | |
| Confidence: | 50.69897 |
| Match: | 2f6qA |
| Description: | The crystal structure of human peroxisomal delta3, delta2 enoyl CoA isomerase (PECI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3-hydroxyacyl-CoA dehydrogenase activity | 4.25084649365698 | bayes_pls_golite062009 |
| enoyl-CoA hydratase activity | 3.92947460544831 | bayes_pls_golite062009 |
| CoA carboxylase activity | 3.59076614105466 | bayes_pls_golite062009 |
| ligase activity, forming carbon-carbon bonds | 3.4980371783229 | bayes_pls_golite062009 |
| acetyl-CoA carboxylase activity | 3.34692152434862 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing C=C bonds | 1.97586838275054 | bayes_pls_golite062009 |
| dodecenoyl-CoA delta-isomerase activity | 1.80820904754223 | bayes_pls_golite062009 |
| peptidase activity | 1.47343502162051 | bayes_pls_golite062009 |
| catalytic activity | 1.46154163027498 | bayes_pls_golite062009 |
| 3-hydroxybutyryl-CoA epimerase activity | 1.31614278936637 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 1.23984584411791 | bayes_pls_golite062009 |
| propionyl-CoA carboxylase activity | 1.20853698666984 | bayes_pls_golite062009 |
| binding | 1.20603792135994 | bayes_pls_golite062009 |
| nucleic acid binding | 1.15490979946714 | bayes_pls_golite062009 |
| acyl-CoA binding | 1.11251823193438 | bayes_pls_golite062009 |
| racemase and epimerase activity, acting on hydroxy acids and derivatives | 1.08284170936757 | bayes_pls_golite062009 |
| long-chain-3-hydroxyacyl-CoA dehydrogenase activity | 1.03484393216342 | bayes_pls_golite062009 |
| ligase activity | 0.98581896521131 | bayes_pls_golite062009 |
| endopeptidase activity | 0.875283244957267 | bayes_pls_golite062009 |
| long-chain-enoyl-CoA hydratase activity | 0.571617594666499 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.33742439899675 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.317691759858941 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.231579308140546 | bayes_pls_golite062009 |
| hydrolase activity | 0.167287221009063 | bayes_pls_golite062009 |
