| Protein: | SPCC645.13 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 721 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC645.13.
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..2] | [664..702] |
|
|
329.0 | [0..2] | [664..697] |
|
|
324.0 | [0..2] | [663..675] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MVRKSTRRTA KASEKPPETV VRCVCKSQED IGDTWVQCDG CDCWQHASCV GLADKDIPES 60
61 YYCEVCHSRS DVSSQVQNSP N
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 2f6jA |
| Description: | No description for 2f6jA was found. |
|
Region A: Residues: [82-178] |
1 11 21 31 41 51
| | | | | |
1 KDEEHQTADL LASNEGNEKN NEENNVVSSD SKEAITKESG AELESSEPAS TNSNVGMTTR 60
61 SGRQSPRTPI GSTTPKSSHS PPSTRKRRGS VGTTATH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [179-360] |
1 11 21 31 41 51
| | | | | |
1 TKRSKNAPKT SPKDASNETA DQEKELSLHT SIDEIQNPVR KSVAKAWVSV FEKIIEKAKL 60
61 EGVQGLEDLN STSLALQLEH IMFMVLSYTT DHSLTPNNKY REKFRALRFN LVDDKNPAFR 120
121 ARVLKNEISF NDLVNLSSEE MANPDLKNLA EEIRQQSTEN TVIKQHLIAP RDRLLDEDKL 180
181 TQ
|
| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 2dmeA |
| Description: | No description for 2dmeA was found. |
|
Region A: Residues: [361-447] |
1 11 21 31 41 51
| | | | | |
1 QDELGIAEND DAMFPKPPGE LVAPISIAEE EPTIDSKSPT LPEHNPLSED DTSNGDKAAK 60
61 RKGSFNDTKP IVNVPSIVEI DDPTILD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [448-645] |
1 11 21 31 41 51
| | | | | |
1 IVEEEPLARN DSFSSPYSPA EDMAEESEFF GMKEKIWTGK VKMATVSEFH ANALNLFGDV 60
61 SASHLFEILS ATALIEGRIS VSSVLQYFHA LRKTPSKEII AVLFVPTEQN SQGFDILYDY 120
121 FVKRNRYGVL HSKSNSVKDA YIIPMPSGNS VPELLDLLPK VDLPKDRNFQ YFMGLFVLNK 180
181 SSSRHESVER ATPITTST
|
| Detection Method: | |
| Confidence: | 1.42 |
| Match: | 1ow1A |
| Description: | Crystal structure of the SPOC domain of the human transcriptional corepressor, SHARP. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA binding | 3.54473441396096 | bayes_pls_golite062009 |
| nucleic acid binding | 3.48558304847931 | bayes_pls_golite062009 |
| transcription regulator activity | 2.99210735079034 | bayes_pls_golite062009 |
| binding | 2.41724497205118 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.05998863112202 | bayes_pls_golite062009 |
| promoter binding | 1.83726450182234 | bayes_pls_golite062009 |
| transcription repressor activity | 1.4747942371973 | bayes_pls_golite062009 |
| transcription activator activity | 1.38544336130022 | bayes_pls_golite062009 |
| transcription factor activity | 1.36469181687855 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.10125855381509 | bayes_pls_golite062009 |
| protein binding | 1.08484616730639 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.761344747515317 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.72942170277234 | bayes_pls_golite062009 |
| DNA helicase activity | 0.486136971288514 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.468110073157235 | bayes_pls_golite062009 |
| helicase activity | 0.409609667937952 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.364602306790165 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.323407552453846 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.311579649994958 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.311579649994958 | bayes_pls_golite062009 |
| catalytic activity | 0.284946544609129 | bayes_pls_golite062009 |
| transcription factor binding | 0.147270026435341 | bayes_pls_golite062009 |
|
Region A: Residues: [646-721] |
1 11 21 31 41 51
| | | | | |
1 NGIPSTYQSA SGTPTNPVHS YPSLESIINA LTPSDMLLIK DVVENNPQIR ANPSLAINPQ 60
61 FMQNAISAAQ KKASKQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
