| Protein: | itt1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 435 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for itt1.
| Description | E-value | Query Range |
Subject Range |
|
|
240.0 | [0..3] | [433..122] |
|
|
232.0 | [0..6] | [421..53] |
|
|
230.0 | [0..6] | [421..1] |
|
|
229.0 | [0..6] | [423..1] |
|
|
228.0 | [0..6] | [423..1] |
|
|
227.0 | [0..6] | [421..1] |
|
|
227.0 | [0..6] | [421..1] |
|
|
227.0 | [0..6] | [421..1] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MLEVEVESDN KHLVADELIA LQSIYPEIHL DGNNYGRLNI PVNTESDYFL SFKSPDESTL 60
61 TDTIVVRHFP DLVMEFFLPE AYPFNSPPTF FLKSSWLPLK QKRVLTSSLI KLWNEIHDCV 120
121 LFDAIEHVRS IATIAFHLPT EMVFPGGFDD LKKEILAF
|
| Detection Method: |  |
| Confidence: | 17.69897 |
| Match: | 2ebmA |
| Description: | No description for 2ebmA was found. |
|
Region A: Residues: [159-239] |
1 11 21 31 41 51
| | | | | |
1 DKNAKLLEFQ IRKFQCNVCF DEFNGTDCFQ LTRCGHVSCQ SCLRDYYTMC IQEGMFSQIK 60
61 CIDLDCGKDA PVLTLKELES I
|
| Detection Method: | |
| Confidence: | 6.045757 |
| Match: | 1wimA |
| Description: | Solution Structure of the RING finger Domain of the human UbcM4-interacting Protein 4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.65442784325159 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.55686022186257 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.59153177011595 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.07217714843839 | bayes_pls_golite062009 |
| binding | 2.78710909602478 | bayes_pls_golite062009 |
| transcription regulator activity | 2.72498741013971 | bayes_pls_golite062009 |
| protein binding | 2.64803540957326 | bayes_pls_golite062009 |
| nucleic acid binding | 2.32387297115017 | bayes_pls_golite062009 |
| DNA binding | 2.00904221080834 | bayes_pls_golite062009 |
| transcription activator activity | 1.45530270292081 | bayes_pls_golite062009 |
| ligase activity | 1.36029325773279 | bayes_pls_golite062009 |
| transcription factor activity | 1.22579085356684 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.2126425713931 | bayes_pls_golite062009 |
| transcription factor binding | 1.11842175076436 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 1.03469202541773 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.926364718530146 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.90321253993065 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.50197530717959 | bayes_pls_golite062009 |
| transcription repressor activity | 0.350170315296021 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 0.265769062717221 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.24963159801049 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.233838999434784 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
|
Region A: Residues: [240-325] |
1 11 21 31 41 51
| | | | | |
1 VGVQLTNRYK ELEEKRRYEN DSNIIFCPRS FCQGPSKRDP GQKLAICQKC DFAFCSFCQA 60
61 TWHGDLSPCK LEGDSKKLVE MYLNYQ
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 2jmoA |
| Description: | No description for 2jmoA was found. |
|
Region A: Residues: [326-435] |
1 11 21 31 41 51
| | | | | |
1 ENEPEKALEL EKRYGKRIID RLVEQVKNDE EAEKWVLLNG QRCPTCDRVV ERIDGCCHMN 60
61 CLCGTHFCFL CGAYLMEQNP YKHFNDPVSS CYGMLFASAA EKQRFSENWT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
