| Protein: | SPBC2A9.04c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 741 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC2A9.04c.
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..5] | [728..684] |
|
|
259.0 | [0..2] | [732..1290] |
|
|
255.0 | [0..3] | [739..213] |
|
|
243.0 | [0..37] | [683..1368] |
|
|
227.0 | [0..27] | [705..761] |
|
|
216.0 | [0..21] | [737..107] |
|
|
212.0 | [0..5] | [731..2327] |
|
|
206.0 | [0..16] | [724..264] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MDSNTNENNS HASSNERQSS EGHDDYLNRN PNSEATEGEE GTHPTTGTQP VAFSIGTMFI 60
61 ITPQANFEGG ENDPFANPFQ PPVKRAVKEA WDSFEPLSND QLMDLTCPIC YDDMNENDEK 120
121 QATKMPCGHI FGKNCLQKWL ENHCTCPLCR KEVPHETVGS
|
| Detection Method: |  |
| Confidence: | 3.17 |
| Match: | 1u6gB |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.25982737281228 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.16068345159314 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.24782814163304 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 2.79292110382407 | bayes_pls_golite062009 |
| binding | 2.70912934275371 | bayes_pls_golite062009 |
| transcription regulator activity | 2.69310847474187 | bayes_pls_golite062009 |
| nucleic acid binding | 2.31493818053907 | bayes_pls_golite062009 |
| DNA binding | 2.0126776192216 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91556680192956 | bayes_pls_golite062009 |
| protein binding | 1.48593945455888 | bayes_pls_golite062009 |
| transcription factor activity | 1.23220438818624 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.02238152139385 | bayes_pls_golite062009 |
| transcription factor binding | 0.987482369490121 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.821040441472875 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.356312424125648 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.308921486763847 | bayes_pls_golite062009 |
| ligase activity | 0.227034354896905 | bayes_pls_golite062009 |
| hydrolase activity | 0.185228576891116 | bayes_pls_golite062009 |
| catalytic activity | 0.168711389690753 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.137379573046724 | bayes_pls_golite062009 |
| transcription activator activity | 0.111490592727037 | bayes_pls_golite062009 |
| peptidase activity | 0.107857202210184 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 0.0136579100966835 | bayes_pls_golite062009 |
|
Region A: Residues: [161-306] |
1 11 21 31 41 51
| | | | | |
1 AHPPILFIIP HSHTLRGNQG NTAVSQENAS NGVHSDFHPS EELNNANTDG RTGVDEPARQ 60
61 LHRIAFNRIR FILAPNRSAT NTPVENTHPE NPDSNTSTPT TRSEPLAGEG ASIDAENASS 120
121 RQETTPSDSR PSTLTSLFNA FFSSMP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [307-477] |
1 11 21 31 41 51
| | | | | |
1 DRPSSNEPMT SNLTSNSGSM TNSTSTDLPT SNLPSQNAPA RPVEPSPSIQ PPNLLNLPTA 60
61 SPESTSWLPG SQTNIPANTN RSERPFTQLM TFHGLPSLAD LPAVLESMFR PSGNNNLLNL 120
121 NGIFHPDHNA QTENGQTLPE NTDDTNSNAT SAVPNLQNLN QQNAVTMGTN T
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [478-741] |
1 11 21 31 41 51
| | | | | |
1 PNNGSSPAVH PVIHIYLSRP PLQPAVSEQE TPSEAVSREG TRSTDATMED SSRPPSNGSF 60
61 QGPGITHLSE MGQRILQRFQ EEMENRMNQT RSESSTPAQQ SAAGSSINVD TAGRQPSDEI 120
121 NIPGEYENSS EVAGSRNQTP THSSIAVDTL SNVAVDQPAI STPSDVVGSD AGDTSKVSSG 180
181 TSTPRMAAPI ARRSNRHHPY SRPSSTRPQC QLEDQGICDP NDRFVHFECG HSVHERCQQS 240
241 TSNSENQMDE EIGECPKCRN EEHK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
