| Protein: | kap113 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 983 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kap113.
| Description | E-value | Query Range |
Subject Range |
|
|
522.0 | [0..1] | [983..1] |
|
|
521.0 | [0..1] | [983..1] |
|
|
521.0 | [0..1] | [983..1] |
|
|
517.0 | [0..1] | [983..1] |
|
|
509.0 | [0..1] | [983..1] |
|
|
509.0 | [0..1] | [983..1] |
|
|
483.0 | [0..1] | [983..1] |
|
Region A: Residues: [1-899] |
1 11 21 31 41 51
| | | | | |
1 MQVDPVVYQL QRAVSQDPIA VKDAEGHLNN WKKEPGFFGK LYSIFLDKQN DMSLRWIAII 60
61 QLRNSIDIIW RKNTKMSLLP EERDFIRCNA LLGSIKSENL LSIQNALVVS RIARLDYPTE 120
121 WPSLFHDLLG KLQQSLGTGD YDVALRLLIT LHHIIKAMAG NRLLRSRQIF YKLAPELLTI 180
181 LQPILHSSLS SWMMILESSK EIKDSTLLSY MQISRYTLKA CRRLVVFGFQ NPSESEFSER 240
241 MLAFCAVHQR KLLSMLGTML QSSRSPIVVG ECLEMAFAHA FLFNKPFFDF SFYSPCLTKF 300
301 PATIDYISLH YDFLGQISSH LSSYKEKFEE SSKNFEKLVI MSLRVFILVI QEFCNTKSSH 360
361 PETAQVLYNS FLVDNRINNL LDLLITKLLI LKEEDFEEWT DSPQQWVLEQ STQDVEFNVR 420
421 PCAEKLLKCF FDAYGDIIVS PFKDMIYSVF ECPKTLTQAV QQDTLISSFG VGYTQLKSIF 480
481 PFAKWLQEAA VPNMASINDI GISRVYRRRI AIFLSQWIED SSSEQLLEVI YKLYCSFLNL 540
541 TDPCNDAVVI LTTIDAFKTV LDDWNFSENS FLSIKENLFV HVLSLFKAFE SVDARTSILS 600
601 LLGTLLARAG EHVAPMESTI ASLLSQLWDG WKKEPLLRAR VLAVMHQFVN AIKAKSFEFS 660
661 TFLYTVIEYC VNPESPEHVI FEADAMELWS TFLMYIQKLP ETFTLLIPHL LYHLSQATST 720
721 LPFVLMIVSS YQLLDNTVLM KDYSFTIFEK LNDLLDDVKN ETLQALCKTV CLLIETTPMD 780
781 MIYESLLNSS LLSRLLLSIA TNDKHPQVLI EYLLVVSRIS LREPELILKV CQTKNINIAM 840
841 LIGNWILLND HINHSKDRKL NTLALSSLLR TNHPDVLAVL DSIMNLWFSV LSEVEEDAN
|
| Detection Method: |  |
| Confidence: | 94.0 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 2.13470398426489 | bayes_pls_golite062009 |
| RNA binding | 1.91507786651888 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| nucleic acid binding | 1.00841167631924 | bayes_pls_golite062009 |
| signal sequence binding | 0.84634722220211 | bayes_pls_golite062009 |
| signal transducer activity | 0.662662274021266 | bayes_pls_golite062009 |
| molecular transducer activity | 0.662662274021266 | bayes_pls_golite062009 |
| transcription regulator activity | 0.385452858197632 | bayes_pls_golite062009 |
| mRNA binding | 0.37278269424461 | bayes_pls_golite062009 |
| DNA binding | 0.309260217284589 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
|
Region A: Residues: [900-983] |
1 11 21 31 41 51
| | | | | |
1 GDATIYYKND DYSAVGFYLD ETSEEMTRRK QLLLKDPVHS VNSRSFFISV FMFCRDANGG 60
61 MENFQNQYLS TVNPALLEQF QSML
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
