| Protein: | imp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 539 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for imp1.
| Description | E-value | Query Range |
Subject Range |
|
|
383.0 | [0..1] | [532..1] |
|
|
383.0 | [0..1] | [532..1] |
|
|
383.0 | [0..1] | [532..1] |
|
|
380.0 | [0..1] | [532..1] |
|
|
380.0 | [0..1] | [532..1] |
|
|
379.0 | [0..1] | [532..1] |
|
Region A: Residues: [1-539] |
1 11 21 31 41 51
| | | | | |
1 MESRYLSDRR SRFKSKGVFK ADELRRQREE QQIEIRKQKR EESLNKRRNL NAVLQNDIDV 60
61 EEEADQSQVQ MEQQMKDEFP KLTADVMSDD IELQLGAVTK FRKYLSKETH PPIDQVIACG 120
121 VVDRFVQFLE SEHHLLQFEA AWALTNIASG TTDQTRIVVD SGAVPRFIQL LSSPEKDVRE 180
181 QVVWALGNIA GDSSACRDYV LGNGVLQPLL NILQSSASDV SMLRNATWTL SNLCRGKNPP 240
241 PNWSTISVAV PILAKLLYSE DVEIIVDACW AISYLSDGPN EKIGAILDVG CAPRLVELLS 300
301 SPSVNIQTPA LRSVGNIVTG TDAQTQIIID CGALNAFPSL LSHQKENIRK EACWTISNIT 360
361 AGNTQQIQAI IESNLIPPLV HLLSYADYKT KKEACWAISN ATSGGLGQPD QIRYLVSQGV 420
421 IKPLCDMLNG SDNKIIQVAL DAIENILKVG EMDRTMDLEN INQYAVYVEE AGGMDMIHDL 480
481 QSSGNNDIYL KAYSIIEKYF SDEDAVEDLA PETENGAFTF GNGPQAQGEF KFDSQDMAM
|
| Detection Method: |  |
| Confidence: | 90.522879 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 3.48172991171337 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| actin binding | 2.8014924948341 | bayes_pls_golite062009 |
| nucleic acid binding | 2.74745843355294 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.61566088685247 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| transcription regulator activity | 2.16673352512615 | bayes_pls_golite062009 |
| DNA binding | 1.95242774903625 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| molecular transducer activity | 1.32874350341969 | bayes_pls_golite062009 |
| signal transducer activity | 1.32874350341969 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| transcription factor activity | 1.20660383756339 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| RNA binding | 0.40024158562931 | bayes_pls_golite062009 |
| structural molecule activity | 0.279926218252647 | bayes_pls_golite062009 |
| importin-alpha export receptor activity | 0.259676026705859 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| transcription activator activity | 0.160275383613705 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
| transcription factor binding | 0.0221966060394205 | bayes_pls_golite062009 |
