| Protein: | brl2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 680 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for brl2.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..4] | [642..1862] |
|
|
236.0 | [0..2] | [642..860] |
|
|
235.0 | [0..2] | [642..860] |
|
|
235.0 | [0..2] | [642..858] |
|
|
234.0 | [0..2] | [642..859] |
|
|
234.0 | [0..2] | [642..857] |
|
|
233.0 | [0..2] | [642..874] |
|
|
233.0 | [0..2] | [642..856] |
|
Region A: Residues: [1-326] |
1 11 21 31 41 51
| | | | | |
1 MYQNGKPDAP TILGQKRELE DVEIQDDDIQ EVSKEDLLKD VRVRSIQFDE LESKIEGLQN 60
61 LAEEKLKVLA TLVSWWPEIL QQFSVVFQGN ELKDFESEGV FSILEKFPEL SYFNDAVKNN 120
121 KTKALSIIQK LLSTVDSSTN SVSRDPFSVL SIDDSALTEK LNTINLDIDK ILDELDTTRS 180
181 QLHSIIKLPD RSSSFTLQCI NESVRPQSTK VKEEATTSSK GKDEEKKVST VEQRTQLQQL 240
241 SRLQDQQNGL MESRSQSLKI LDSNVNEMDK LIMERENALN NVETTNLKKY SSFLALKEAV 300
301 SMTSEQLRVL EHLLSECSHE INVLSQ
|
| Detection Method: |  |
| Confidence: | 18.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-589] |
1 11 21 31 41 51
| | | | | |
1 QSKNFNGVFE SSYQPLINDL DHQISVMQND EKRINNAKTE LSLSLEKKLE AKKQKEKVYK 60
61 DKLDELANLE TMVLEKKKAV ATREAANKIR LVDLNDLELQ KDLSTYLSKE LASTEKAFRL 120
121 VKQQTVKSSH SHYQELITKF SVEKEKAEQK YFLTMKSTDS LHAEVKLLRQ KYQKTNEIIS 180
181 KMLNSQDTAV HRIIEFEDQL ARLSSVRNNS IKQSTTFQVK KSSQKSTIQN LEEKVSYLQQ 240
241 FMDKNNATLT DLEFQCSDLS SSI
|
| Detection Method: | |
| Confidence: | 10.522879 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [590-680] |
1 11 21 31 41 51
| | | | | |
1 DILSKQDEEH EKEKRKLKDT GVSTSAEELK TFRAMCKCSV CNFERWKDRI ISLCGHGFCY 60
61 QCIQKRIETR QRRCPICGRG FGASDVIPIH L
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1hyiA |
| Description: | Eea1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small conjugating protein ligase activity | 6.59529767480757 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 5.83903906079477 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 4.99298545019925 | bayes_pls_golite062009 |
| histone binding | 3.01402804224903 | bayes_pls_golite062009 |
| binding | 2.93415748500038 | bayes_pls_golite062009 |
| transcription regulator activity | 2.89424169822343 | bayes_pls_golite062009 |
| DNA binding | 2.67786232715949 | bayes_pls_golite062009 |
| nucleic acid binding | 2.6327300364647 | bayes_pls_golite062009 |
| histone methyltransferase activity | 2.02130427551376 | bayes_pls_golite062009 |
| methylated histone residue binding | 1.80051107279585 | bayes_pls_golite062009 |
| ligase activity | 1.77568859874674 | bayes_pls_golite062009 |
| transcription factor activity | 1.62385700361588 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.49667541832007 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.49585178848749 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.49585178848749 | bayes_pls_golite062009 |
| protein binding | 1.42349040268084 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.3339105639569 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.3339105639569 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.3339105639569 | bayes_pls_golite062009 |
| chromatin binding | 1.04248905371583 | bayes_pls_golite062009 |
| deacetylase activity | 0.930628753249637 | bayes_pls_golite062009 |
| transcription activator activity | 0.739132967687069 | bayes_pls_golite062009 |
| transcription repressor activity | 0.507152521861549 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.499452745852361 | bayes_pls_golite062009 |
| protein kinase activity | 0.405766438875014 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.327424740985033 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.194167864611162 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.14235705491362 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.137650352572163 | bayes_pls_golite062009 |
| nucleosome binding | 0.113716463693321 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0901653273812402 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0725773086825168 | bayes_pls_golite062009 |
| protein deacetylase activity | 0.0593271945476304 | bayes_pls_golite062009 |
| transcription factor binding | 0.0538806851320555 | bayes_pls_golite062009 |
| histone deacetylase activity | 0.0258084204536424 | bayes_pls_golite062009 |
| kinase activity | 0.00387875923819597 | bayes_pls_golite062009 |
