| Protein: | dnm1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 781 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dnm1.
| Description | E-value | Query Range |
Subject Range |
|
|
739.0 | [0..1] | [780..1] |
|
|
734.0 | [0..1] | [780..6] |
|
|
731.0 | [0..1] | [780..6] |
|
Region A: Residues: [1-352] |
1 11 21 31 41 51
| | | | | |
1 MEQLIPLVNQ LQDLVYNTIG SDFLDLPSIV VVGSQSCGKS SVLENIVGKD FLPRGTGIVT 60
61 RRPLILQLIN LKRKTKNNHD EESTSDNNSE ETSAAGETGS LEGIEEDSDE IEDYAEFLHI 120
121 PDTKFTDMNK VRAEIENETL RVAGANKGIN KLPINLKIYS TRVLNLTLID LPGLTKIPVG 180
181 DQPTDIEAQT RSLIMEYISR PNSIILAVSP ANFDIVNSEG LKLARSVDPK GKRTIGVLTK 240
241 LDLMDQGTNA MDILSGRVYP LKLGFVATVN RSQSDIVSHK SMRDALQSER SFFEHHPAYR 300
301 TIKDRCGTPY LAKTLSNLLV SHIRERLPDI KARLSTLISQ TQQQLNNYGD FK
|
| Detection Method: |  |
| Confidence: | 92.221849 |
| Match: | 1jwyB |
| Description: | Dynamin G domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 6.13591371239337 | bayes_pls_golite062009 |
| motor activity | 4.04927796049806 | bayes_pls_golite062009 |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| tubulin binding | 2.67743463093593 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 2.65631438185675 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.61775212528604 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.61467977505707 | bayes_pls_golite062009 |
| microtubule binding | 2.59155206524122 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.57552435627908 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.57107347424517 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.57054427875021 | bayes_pls_golite062009 |
| microfilament motor activity | 2.51786963027655 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.50494515048649 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.43862163407966 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| actin binding | 2.2973522188675 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| DNA binding | 2.12258000781149 | bayes_pls_golite062009 |
| transcription regulator activity | 2.09345198747025 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.91091452720653 | bayes_pls_golite062009 |
| hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.56325751172863 | bayes_pls_golite062009 |
| actin filament binding | 1.28204719195916 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.977237423302079 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 0.92105578610354 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| transcription factor activity | 0.887108427603557 | bayes_pls_golite062009 |
| GTPase activity | 0.83849854735032 | bayes_pls_golite062009 |
| molecular transducer activity | 0.683309012097319 | bayes_pls_golite062009 |
| signal transducer activity | 0.683309012097319 | bayes_pls_golite062009 |
| glutamate receptor binding | 0.67946233728984 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.557919489256916 | bayes_pls_golite062009 |
| protein transporter activity | 0.498432226280822 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.46552249844591 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| signal recognition particle binding | 0.29390189699022 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 0.213018989352421 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.123304946374679 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| minus-end-directed microtubule motor activity | 0.068779631341469 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
|
Region A: Residues: [353-584] |
1 11 21 31 41 51
| | | | | |
1 LSDQSQRGII LLQAMNRFAN TFIASIDGNS SNIPTKELSG GARLYSIFNN VFTTALNSID 60
61 PLQNLSTVDI RTAILNSTGS RATLFLSEMA FDILVKPQLN LLAAPCHQCV ELVYEELMKI 120
121 CHYSGDSDIS HFPKLQTALV ETVSDLLREN LTPTYSFVES LIAIQSAYIN TNHPDFLGVQ 180
181 GAMAVVLSRK EQNRLMLSQE NDEPISSALD TVKPDGIELY SSDPDTSVKS IT
|
| Detection Method: | |
| Confidence: | 44.638272 |
| Match: | PF01031.11 |
| Description: | No description for PF01031.11 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [585-685] |
1 11 21 31 41 51
| | | | | |
1 NKATNEITTL KSDDSAKMQP LDVLASKRYN NAFSTETAER KTFLSYVFGA NNATRKAMSI 60
61 DKSSSYPLND SLSGGDTNHK NNHPLKMTDL SNEVETMALE D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [686-781] |
1 11 21 31 41 51
| | | | | |
1 MSEREEVEVD LIKELITSYF NLTRKIIIDQ VPKVIMHLLV NASKDAIQNR LVSKLYREDF 60
61 FDTLLIEDEN VKSEREKCER LLSVYNQANK IISTVF
|
| Detection Method: | |
| Confidence: | 41.744727 |
| Match: | PF02212.9 |
| Description: | No description for PF02212.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.947 | 0.027 | mitochondrial outer membrane | a.47.2 | t-snare proteins |
