| Protein: | pfs2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 509 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pfs2.
| Description | E-value | Query Range |
Subject Range |
|
|
536.0 | [0..1] | [508..1178] |
|
|
518.0 | [0..1] | [508..1092] |
|
|
509.0 | [0..1] | [509..571] |
|
|
502.0 | [0..1] | [508..870] |
|
|
498.0 | [0..1] | [508..654] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MERAENARII QKPMTRRTVD YGSGLSKYIV NRHLRSNRYH IHVPRPNPNQ IINLYPPYEY 60
61 KYNNTSSLCT KYIHTSANKA R
|
| Detection Method: |  |
| Confidence: | 69.39794 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
|
Region A: Residues: [82-143] |
1 11 21 31 41 51
| | | | | |
1 HVINVVRWTP DGRRLLTGSS TGEFTLWNGL TFNFELINQS HDYAVRCAEW STDGRWLISG 60
61 DG
|
| Detection Method: | |
| Confidence: | 24.39794 |
| Match: | 1k8kC |
| Description: | Arp2/3 complex 41 kDa subunit ARPC1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [144-509] |
1 11 21 31 41 51
| | | | | |
1 GGMVKYFEPN LNNVKIVQAH EMEVRDVAFS PNDSKFVTAS DDGSLKVWNF HMSTEELKLT 60
61 GHGWDVKTVD WHPSKGLLAS GSKDNLVKFW DPRTGTCIAT LHGHKNTIMQ ASFQKNFGSN 120
121 YLATVSRDST CRVFDLRAMK DVRVLRGHEK DVNCVTWHPL YPNLLTTGGS DGSVNHYSLD 180
181 EPPLLSQQKY HEKHPNVTLS ASSYLLYPTA EIPFAHDLGI WSMQYHPLGH LLCTGSNDKT 240
241 TRFWSRSRPD DKESTMDRHH LGEEQSEAML SQRKAAIEED DNYEPDENPL TETLANAHNP 300
301 QFSGVLNLPG LGTMPSFPSP YQHGQPQIPG MLHASLSNSY AEPSTQNSFI PGLTSKSQDG 360
361 YPQNYR
|
| Detection Method: | |
| Confidence: | 50.39794 |
| Match: | 1gg2B |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 6.67009948605948 | bayes_pls_golite062009 | |
| RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
| actin binding | 3.31804728298431 | bayes_pls_golite062009 |
| snoRNA binding | 3.28507672512266 | bayes_pls_golite062009 |
| GTPase activity | 3.23750443966606 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| transcription repressor activity | 2.29049708962212 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| dynactin binding | 1.85146647785657 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| actin filament binding | 1.5197243426595 | bayes_pls_golite062009 |
| structural molecule activity | 1.47097979074281 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.41752877005447 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.21305848427711 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 1.11754260203517 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| ligase activity | 0.93058496790047 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.676924760416604 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 0.443846546939402 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.168317261786777 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| chromatin binding | 0.151977098745772 | bayes_pls_golite062009 |
| kinase activity | 0.127621956173205 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
