| Protein: | slp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 488 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for slp1.
| Description | E-value | Query Range |
Subject Range |
|
|
447.0 | [0..2] | [487..1167] |
|
|
431.0 | [0..2] | [487..1039] |
|
|
418.0 | [0..3] | [486..986] |
|
|
413.0 | [0..4] | [486..604] |
|
|
400.0 | [0..2] | [486..948] |
|
Region A: Residues: [1-166] |
1 11 21 31 41 51
| | | | | |
1 MEIAGNSSTI SPTFSTPTKK RNLVFPNSPI TPLHQQALLG RNGRSSKRCS PKSSFIRNSP 60
61 KIDVVNTDWS IPLCGSPRNK SRPASRSDRF IPSRPNTANA FVNSISSDVP FDYSESVAEA 120
121 CGFDLNTRVL AFKLDAPEAK KPVDLRTQHN RPQRPVVTPA KRRFNT
|
| Detection Method: |  |
| Confidence: | 3.221849 |
| Match: | 1l0qA |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [167-488] |
1 11 21 31 41 51
| | | | | |
1 TPERVLDAPG IIDDYYLNLL DWSNLNVVAV ALERNVYVWN ADSGSVSALA ETDESTYVAS 60
61 VKWSHDGSFL SVGLGNGLVD IYDVESQTKL RTMAGHQARV GCLSWNRHVL SSGSRSGAIH 120
121 HHDVRIANHQ IGTLQGHSSE VCGLAWRSDG LQLASGGNDN VVQIWDARSS IPKFTKTNHN 180
181 AAVKAVAWCP WQSNLLATGG GTMDKQIHFW NAATGARVNT VDAGSQVTSL IWSPHSKEIM 240
241 STHGFPDNNL SIWSYSSSGL TKQVDIPAHD TRVLYSALSP DGRILSTAAS DENLKFWRVY 300
301 DGDHVKRPIP ITKTPSSSIT IR
|
| Detection Method: | |
| Confidence: | 57.221849 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 6.67009948605948 | bayes_pls_golite062009 | |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.25521258308263 | bayes_pls_golite062009 |
| GTPase activity | 3.23750443966606 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| actin binding | 2.82238441497141 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| snoRNA binding | 2.27164613239345 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| transcription repressor activity | 2.10542371217826 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10348788067437 | bayes_pls_golite062009 |
| nucleic acid binding | 2.00420268007946 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| tubulin binding | 1.71990413056683 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.59258100795958 | bayes_pls_golite062009 |
| microtubule binding | 1.58000769768764 | bayes_pls_golite062009 |
| DNA binding | 1.53482914288832 | bayes_pls_golite062009 |
| structural molecule activity | 1.47097979074281 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.29070899918311 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| dynactin binding | 1.11168036488973 | bayes_pls_golite062009 |
| actin filament binding | 1.10832047454002 | bayes_pls_golite062009 |
| mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| dynein binding | 0.94661325264568 | bayes_pls_golite062009 |
| type 1 angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| transcription factor activity | 0.897833210520351 | bayes_pls_golite062009 |
| transporter activity | 0.807925044108643 | bayes_pls_golite062009 |
| transcription activator activity | 0.724420384084538 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.625780732991652 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.535041400676017 | bayes_pls_golite062009 |
| transcription factor binding | 0.469377587704245 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.428715007921149 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.414491774707324 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 0.251120087240234 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.245000508226811 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| DNA helicase activity | 0.220747580531792 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| myosin binding | 0.16849147094895 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| kinase activity | 0.08280915441667 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
