| Protein: | shk2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 589 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for shk2.
| Description | E-value | Query Range |
Subject Range |
|
|
326.0 | [0..6] | [580..53] |
|
|
326.0 | [0..4] | [585..51] |
|
|
323.0 | [0..6] | [585..53] |
|
|
313.0 | [0..50] | [589..562] |
|
|
313.0 | [0..167] | [589..9] |
|
|
313.0 | [0..1] | [589..1] |
|
|
313.0 | [0..164] | [589..5] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MLLSVRGVPV EIPSLKDTKK SKGIIRSGWV MLKEDKMKYL PWTKKWLVLS SNSLSIYKGS 60
61 KSESAQVTLL LKDIQKVERS KSRTFCFKLR FKSSTKNFEI QACELSVADN MECYEWMDLI 120
121 SSRALASKVS SPMNPKHQVH VGIDNEGNYV GLPKEWILLL QSSSITKQEC MEEPKAVIQA 180
181 LDFY
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 1evtC |
| Description: | Fibroblast growth factor receptor, FGFR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| telethonin binding | 4.65477965121932 | bayes_pls_golite062009 |
| structural constituent of muscle | 4.13965049450794 | bayes_pls_golite062009 |
| receptor activity | 4.00123250685257 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.81769911097805 | bayes_pls_golite062009 |
| alpha-actinin binding | 3.78238468811253 | bayes_pls_golite062009 |
| binding | 3.17641566810715 | bayes_pls_golite062009 |
| molecular transducer activity | 3.10913345555941 | bayes_pls_golite062009 |
| signal transducer activity | 3.10913345555941 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.59139016029428 | bayes_pls_golite062009 |
| actin binding | 2.2974991205682 | bayes_pls_golite062009 |
| protein binding | 2.22855404705168 | bayes_pls_golite062009 |
| tubulin binding | 2.08792429244614 | bayes_pls_golite062009 |
| actinin binding | 1.66611153821577 | bayes_pls_golite062009 |
| antigen binding | 1.63189745559168 | bayes_pls_golite062009 |
| actin filament binding | 1.60525682912279 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.52958974617075 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.47807703678891 | bayes_pls_golite062009 |
| nucleic acid binding | 1.46196700012641 | bayes_pls_golite062009 |
| kinase activity | 1.39954632432505 | bayes_pls_golite062009 |
| protein kinase activity | 1.36635494500222 | bayes_pls_golite062009 |
| DNA binding | 1.30832040941913 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.30657787244536 | bayes_pls_golite062009 |
| transcription regulator activity | 1.30604420685085 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 1.24730237107473 | bayes_pls_golite062009 |
| growth factor binding | 1.21242049144353 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.20218845204373 | bayes_pls_golite062009 |
| myosin light chain kinase activity | 1.17845072849922 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.02428106476324 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.965431415167831 | bayes_pls_golite062009 |
| peptide antigen binding | 0.90772544726282 | bayes_pls_golite062009 |
| protein complex binding | 0.83543827718565 | bayes_pls_golite062009 |
| transferase activity | 0.756515665570446 | bayes_pls_golite062009 |
| peptide binding | 0.729048089532569 | bayes_pls_golite062009 |
| transcription factor activity | 0.65158151382396 | bayes_pls_golite062009 |
| receptor binding | 0.632627479346393 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 0.610042878900289 | bayes_pls_golite062009 |
| structural molecule activity | 0.567620977360967 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.564762108830441 | bayes_pls_golite062009 |
| IgG binding | 0.39706457466099 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.318890055375093 | bayes_pls_golite062009 |
| gamma-tubulin binding | 0.236289246965336 | bayes_pls_golite062009 |
| olfactory receptor activity | 0.20101044847022 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 0.0972287515196089 | bayes_pls_golite062009 |
|
Region A: Residues: [185-302] |
1 11 21 31 41 51
| | | | | |
1 SKQLDTTSET KDSFSFCKET LPRSSTTSYS IRDADKHHKL TTSGVTKMNI TERCKPKTTI 60
61 QTDKKHIIRP FIEDKSHVES IMTGKVTKVP VKADSKNTLS RRMTDRQALA MLKDSVTS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [303-589] |
1 11 21 31 41 51
| | | | | |
1 HDPVEYFNVK HKLGQGASGS VYLAKVVGGK QLGIFDSVAI KSIDLQCQTR KELILNEITV 60
61 MRESIHPNIV TYLDSFLVRE RHLWVVMEYM NAGSLTDIIE KSKLTEAQIA RICLETCKGI 120
121 QHLHARNIIH RDIKSDNVLL DNSGNIKITD FGFCARLSNR TNKRVTMVGT PYWMAPEVVK 180
181 QNEYGTKVDI WSLGIMIIEM IENEPPYLRE DPIRALYLIA KNGTPTLKKP NLVSKNLKSF 240
241 LNSCLTIDTI FRATAAELLT HSFLNQACPT EDLKSIIFSR KANTHIN
|
| Detection Method: | |
| Confidence: | 78.0 |
| Match: | 1f3mC |
| Description: | pak1 |
Matching Structure (courtesy of the PDB): |
|
