| Protein: | seh1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for seh1.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..1] | [338..1145] |
|
|
287.0 | [0..1] | [337..1243] |
|
|
284.0 | [0..1] | [338..1199] |
|
|
283.0 | [0..3] | [337..810] |
|
|
270.0 | [0..3] | [338..914] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MDDISATTIQ TNHQDLVNDV TYDFYGRRMV SCSADQRVKV YDFNDDTETW AITSEWRAGD 60
61 ASLMRVAWAH PSFGQVLAVC SLDRGVRIYE EQKKNFESKT WVEVAKLMDA RSAVLDISFC 120
121 PFQHGCKLAA VSADATLRIY EAMEPGNLTY WTLMNEIALM PSPPSRNEQP AFCVNWCPSR 180
181 WREQYIAVGC MNDAYIYKQN SHGKWKKVAE LPGHTDLIRD ICWAPSMGSS YYLIATACKD 240
241 GNVRIFKVET LCEEVFQEEE DAGNSMTEDS NFNLNSLKVE LIGEYDNHKC QVWRCRFNVT 300
301 GTILSSSGDD GCVRLWKASY ANLFKCISVV SLEKKPEKL
|
| Detection Method: |  |
| Confidence: | 50.0 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| GTPase activity | 1.66665311782591 | bayes_pls_golite062009 |
| snoRNA binding | 1.61553185503007 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.59258100795958 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| 0.88172763425403 | bayes_pls_golite062009 | |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| structural molecule activity | 0.721739615005709 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.676924760416604 | bayes_pls_golite062009 |
| transcription repressor activity | 0.658573452658359 | bayes_pls_golite062009 |
| molecular transducer activity | 0.577438981735303 | bayes_pls_golite062009 |
| signal transducer activity | 0.577438981735303 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.535041400676017 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.359536347486199 | bayes_pls_golite062009 |
| receptor activity | 0.322599767074871 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.182612389752591 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.168317261786777 | bayes_pls_golite062009 |
| chromatin binding | 0.151977098745772 | bayes_pls_golite062009 |
| kinase activity | 0.127621956173205 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.121872424136545 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
