| Protein: | mcl1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 815 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mcl1.
| Description | E-value | Query Range |
Subject Range |
|
|
632.0 | [0..6] | [664..1165] |
|
|
616.0 | [0..2] | [661..895] |
|
|
613.0 | [0..2] | [680..768] |
|
|
598.0 | [0..4] | [658..1035] |
|
|
575.0 | [0..6] | [627..641] |
|
|
572.0 | [0..6] | [697..838] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MAGNRLVPRY AHTDGLTRLA YTRDGKFLLT VGSNQVIRKF QVGSDEEPDS IDNHQDPITG 60
61 IAVAENYFCT CSE
|
| Detection Method: |  |
| Confidence: | 83.39794 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
|
Region A: Residues: [74-639] |
1 11 21 31 41 51
| | | | | |
1 DATVCVYPID SPTEHTLLAR TTLPIRDVAY SVDGNWIAIA SDETAVKVVS STDSSQIFSL 60
61 RPAKASNKHV TYSPNGNFLA VSSCNGILYF YDTQTRELIK FLTNTIASLE AESEICSKAA 120
121 WHPKNGTFAV ASTDHFVSVI SPDDWLPLYK LLPKENHSGV TDISWSSNGM YIAASFKKGG 180
181 ILIWDTQSHE VVVELPYSTV VALAWQPFEN VLSFTTNQGI LYSCPDVIPK SILKEENDPT 240
241 KPLTSSKSKN RTSKELDDLF GSDDEQSQNV NDLDGNSANE ENEFINHDGL DSSLDLDGDS 300
301 YMVDENDLNL AKKRKQKALI DRTTTIENGS SKRRLLQASI HKPVHTGSTP WQGNRRYLCL 360
361 NLVGFIWTVQ QDAEHNTITV EFHDETTHRK YHFVDDQKFE MACLDHEGAL YASPATESSP 420
421 GVIYYKAHVD WSRKSEWAMA LPMENESPVT ISLSSSVVLV CTSAGYVRVF SRQGFPISIH 480
481 RSKHLPFVAC SSFQDTIITI ANDGLSSDGN SRLVYSIEDI SRDEMLQTGD GVALPPQGTL 540
541 ESVFFSDVGD PYIYDSTGVL LVLMHW
|
| Detection Method: | |
| Confidence: | 54.522879 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10348788067437 | bayes_pls_golite062009 |
| nucleic acid binding | 2.00420268007946 | bayes_pls_golite062009 |
| DNA binding | 1.53482914288832 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.19593750149343 | bayes_pls_golite062009 |
| transcription factor activity | 0.897833210520351 | bayes_pls_golite062009 |
| 0.88172763425403 | bayes_pls_golite062009 | |
| DNA-dependent ATPase activity | 0.625780732991652 | bayes_pls_golite062009 |
| transcription repressor activity | 0.624053529462119 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.57463592694759 | bayes_pls_golite062009 |
| actin binding | 0.529861581509437 | bayes_pls_golite062009 |
| telomerase activity | 0.51194134550542 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.48357253721614 | bayes_pls_golite062009 |
| transcription factor binding | 0.469377587704245 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.428715007921149 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.245000508226811 | bayes_pls_golite062009 |
| DNA helicase activity | 0.220747580531792 | bayes_pls_golite062009 |
| RNA-directed DNA polymerase activity | 0.18203222513175 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| structural molecule activity | 0.0936365746095786 | bayes_pls_golite062009 |
| RNA binding | 0.0914092269020899 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.0676565515282608 | bayes_pls_golite062009 |
|
Region A: Residues: [640-815] |
1 11 21 31 41 51
| | | | | |
1 RIPGQAKWIP VLDTNELERR KSRQESYWPV TVADNQFHCI LLKGASRYPY FPRPMFTEFD 60
61 FRIPCNTNNP DASTSVPVLE ELQLRNKLFL TLLEDSIGDG DVTEDEKISI ARLEANIDKA 120
121 LLQLIQKACL EERIERVYEL TKTLRRTTSI AAAQKIALHH SLTNVAEKIG NLLSNV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
