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View Structure Prediction Details

Protein: tif213
Organism: Schizosaccharomyces pombe
Length: 446 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tif213.

Description E-value Query
Range
Subject
Range
gi|15805031, gi|... - gi|15805031|ref|NP_284925.1| eukaryotic translation elongation factor 1 alpha 2 [Rattus norvegicus],...
356.0 [0..17] [444..1]
gi|58332686, gi|... - gi|58332686|ref|NP_001011418.1| eukaryotic translation elongation factor 1 alpha 2 [Xenopus (Siluran...
356.0 [0..17] [444..1]
gi|62897525 - gi|62897525|dbj|BAD96702.1| eukaryotic translation elongation factor 1 alpha 1 variant [Homo sapiens...
356.0 [0..17] [444..1]
gi|71040627 - gi|71040627|dbj|BAE16017.1| elongation factor 1 alpha [Hyla japonica]
355.0 [0..17] [444..1]
gi|56377788 - gi|56377788|dbj|BAD74118.1| elongation factor-1 alpha (EF-1alpha) [Pelodiscus sinensis]
355.0 [0..17] [444..1]
gi|61369595 - gi|61369595|gb|AAX43357.1| eukaryotic translation elongation factor 1 alpha 2 [synthetic construct]
355.0 [0..17] [444..1]
gi|47224687 - gi|47224687|emb|CAG00281.1| unnamed protein product [Tetraodon nigroviridis]
355.0 [0..17] [444..1]

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Predicted Domain #1
Region A:
Residues: [1-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENLDISEL SPIHPAIISR QATINIGTIG HVAHGKSTVV KAISGVHTVR FKNELERNIT  60
   61 IKLGYANAKI YKCSNEECPR PGCYRSYSSN KEDHPPCEIC NSPMNLVRHV SFVDCPGHDI 120
  121 LMATMLNGAA VMDAALLLIA GNESCPQPQT SEHLAAIEIM QLKHIIILQN KVDLIRESAA 180
  181 EEHYQSILKF IKGTVAENSP IVPISAQLKY NIDAILEYIV KKIPIPVRDF TTAPRLIVIR 240
  241 SFDVNKPGAE VDDLKGGVAG GSILTGVLRL NDEIEIRPGI VTKDDDGRIR CQPIFSRIIS 300
  301 LFAEHNDLKI AVPGGLIGVG TTVDPTLCRA DRLVGQVLGS KGNLPEVYTE LEINYFLLRR 360
  361 LLGVKSGDKN TTKVQKLAKN EVLMVNIGST STGGRVMMVK ADMAKILLTA PACTEIGEKV 420
  421 ALSRRIEKHW RLIGWAKVVE GKTLKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.69897
Match: 1kjzA
Description: Initiation factor eIF2 gamma subunit, domain II; Initiation factor eIF2 gamma subunit; Initiation factor eIF2 gamma subunit, N-terminal (G) domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
translation elongation factor activity 3.34765067410136 bayes_pls_golite062009
DNA-dependent ATPase activity 2.72462789867829 bayes_pls_golite062009
translation initiation factor activity 2.7201523708414 bayes_pls_golite062009
binding 2.64537357529343 bayes_pls_golite062009
nucleic acid binding 2.51683451033161 bayes_pls_golite062009
DNA helicase activity 2.2817164193758 bayes_pls_golite062009
pyrophosphatase activity 2.13284212711072 bayes_pls_golite062009
DNA binding 2.12258000781149 bayes_pls_golite062009
transcription regulator activity 2.09345198747025 bayes_pls_golite062009
ATP-dependent DNA helicase activity 1.88455339138556 bayes_pls_golite062009
structural constituent of ribosome 1.47858140861683 bayes_pls_golite062009
protein-DNA loading ATPase activity 1.29640539057136 bayes_pls_golite062009
purine ribonucleotide binding 1.2935968641033 bayes_pls_golite062009
ribonucleotide binding 1.2935353851804 bayes_pls_golite062009
purine nucleotide binding 1.29138695385133 bayes_pls_golite062009
nucleotide binding 1.28669586915546 bayes_pls_golite062009
helicase activity 1.16085745407703 bayes_pls_golite062009
motor activity 1.14667913749579 bayes_pls_golite062009
DNA clamp loader activity 1.12431517057397 bayes_pls_golite062009
histone methyltransferase activity 1.06255786387629 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
ATP binding 0.98146619596929 bayes_pls_golite062009
adenyl ribonucleotide binding 0.949788783884952 bayes_pls_golite062009
adenyl nucleotide binding 0.931486373329219 bayes_pls_golite062009
transcription factor activity 0.887108427603557 bayes_pls_golite062009
protein methyltransferase activity 0.876296121718575 bayes_pls_golite062009
structural molecule activity 0.86514677273731 bayes_pls_golite062009
transcription repressor activity 0.862685397469217 bayes_pls_golite062009
kinase activity 0.691112783105676 bayes_pls_golite062009
microtubule motor activity 0.60036517876321 bayes_pls_golite062009
purine NTP-dependent helicase activity 0.59513742813869 bayes_pls_golite062009
ATP-dependent helicase activity 0.59513742813869 bayes_pls_golite062009
cytoskeletal protein binding 0.500462538667228 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.499834566483656 bayes_pls_golite062009
translation regulator activity 0.29096092258568 bayes_pls_golite062009
translation factor activity, nucleic acid binding 0.274994961137851 bayes_pls_golite062009
structure-specific DNA binding 0.249173645231486 bayes_pls_golite062009
protein binding 0.170837278876362 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.147579541298736 bayes_pls_golite062009
centromeric DNA binding 0.120185906020979 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.113504049290503 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.111293884322157 bayes_pls_golite062009
double-stranded DNA binding 0.0781650226500197 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0430764033739892 bayes_pls_golite062009
protein kinase activity 0.0364322017534667 bayes_pls_golite062009
actin binding 0.00482938540552702 bayes_pls_golite062009
lysine N-methyltransferase activity 0.00156323320804219 bayes_pls_golite062009
histone-lysine N-methyltransferase activity 0.00156323320804219 bayes_pls_golite062009
protein-lysine N-methyltransferase activity 0.00156323320804219 bayes_pls_golite062009

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