| Protein: | hsf1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 609 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hsf1.
| Description | E-value | Query Range |
Subject Range |
|
|
524.0 | [0..1] | [609..1] |
|
|
416.0 | [0..46] | [572..68] |
|
|
414.0 | [0..46] | [572..3] |
|
|
412.0 | [0..46] | [572..3] |
|
|
410.0 | [0..46] | [572..3] |
|
|
398.0 | [0..47] | [572..45] |
|
|
390.0 | [0..46] | [572..3] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MIQTASTISS NGGTNQGMES SSANSPEMNG TQNSMSVGMS GSGSSQNRKI TQFSNKLYNM 60
61 VNDSSTDSLI RWSDRGDSFL VIGHEDFAKL VLPRYFKHNN FSSFVRQLNM YGFHKVPHIQ 120
121 QGVLQSDSPN ELLEFANPNF QRDQPELLCL VTRKKA
|
| Detection Method: |  |
| Confidence: | 39.0 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.77201910025409 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| DNA binding | 3.44642410378325 | bayes_pls_golite062009 |
| nucleic acid binding | 3.25777282180864 | bayes_pls_golite062009 |
| transcription factor activity | 2.83460075788873 | bayes_pls_golite062009 |
| transcription repressor activity | 2.39237599101586 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.4788427609721 | bayes_pls_golite062009 |
| transcription activator activity | 1.28486271107855 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| transcription factor binding | 0.63938506997853 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.49916895549368 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.359916369552683 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
|
Region A: Residues: [157-295] |
1 11 21 31 41 51
| | | | | |
1 GSQPVEESNT SLDMSTISSE LQNIRIQQMN LSNELSRIQV DNAALWQENM ENRERQRRHQ 60
61 ETIDKILRFL ASVYLDGKQK PPSKVMPKSR RLLLEAKYPT VSPTNEPSAH SRPSPQGTTA 120
121 NSSSASISSL HNTTPDGEG
|
| Detection Method: | |
| Confidence: | 9.167491 |
| Match: | PF00447.8 |
| Description: | No description for PF00447.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [296-461] |
1 11 21 31 41 51
| | | | | |
1 KYRSVQNGRA LNYVSSFNSD SHSPKDYISQ SYTNEPGLKK ESADSFNNSI DSYISPNQSP 60
61 NTDVPSLNRD DTTDPKVVNT GDIINMLDDA NSIEGSNMNS LSPLLFDYPN SLYPVNNTSS 120
121 EQHHNSYRGS VSNSQPSGNL SESTNLQPVQ PVDYMSNSNP SYGSYN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [462-609] |
1 11 21 31 41 51
| | | | | |
1 AEDQLTNFHP GYAMDQKRIS KLSDGITKQD QNIQALADIL GIPLGDGKID DAGFSANSPT 60
61 NLNLPVSSDL DSVLNIPPNE DVFPDSNPVF DEFTNISNLT SPIEASNGNT FGSNPVSLPN 120
121 QQKSVNPSLM TVSSPRQVRK KRKSSIGA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
