| Protein: | dfp1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dfp1.
| Description | E-value | Query Range |
Subject Range |
|
|
553.0 | [0..49] | [545..9] |
|
|
489.0 | [0..56] | [511..1] |
|
|
479.0 | [0..59] | [543..13] |
|
|
453.0 | [0..82] | [539..66] |
|
|
447.0 | [0..130] | [543..109] |
|
|
438.0 | [0..57] | [539..22] |
|
|
437.0 | [0..49] | [545..9] |
|
|
431.0 | [0..56] | [545..1] |
|
|
422.0 | [0..56] | [545..1] |
|
|
404.0 | [0..56] | [538..1] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MNLGRCPLAP RSANIVLPKH DAVSKQKEYR IEEKTNEAQR EEIITWKDNR EDEGEVKTDF 60
61 EVVNNENIIT TTPKHQTVIT PKSYRKSVKR IKHDAPQNED IPVMKGLAPI NADT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.267 | d.1.1 | Microbial ribonucleases |
| View | Download | 0.213 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.248 | b.34.11 | GW domain |
| View | Download | 0.205 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
|
Region A: Residues: [115-302] |
1 11 21 31 41 51
| | | | | |
1 ESKAESMAAG KVLGSKNSSQ KARLQEWKRQ YKKAFPHFRF YLDGCDPSVA HRVKKQIQQL 60
61 GGHVETFFSG NVTHVATVRA IQDVSVKYAK QDVITKARQL NMKIWSMEKL CNRVLKTLME 120
121 NDQCTTNAPT KQGNDLSYLL YVEKVQGTNE RDLSVPRQDF VHFRGPYLYV HDIANIYKPI 180
181 LLREWQKP
|
| Detection Method: | |
| Confidence: | 1.31 |
| Match: | 1wf6A |
| Description: | The third BRCA1 C-terminus (BRCT) domain of Similar to S.pombe rad4+/cut5+ product |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA binding | 2.67917489541888 | bayes_pls_golite062009 |
| nucleic acid binding | 2.54765715003665 | bayes_pls_golite062009 |
| transcription regulator activity | 2.47222320565852 | bayes_pls_golite062009 |
| damaged DNA binding | 2.36721002778798 | bayes_pls_golite062009 |
| binding | 2.35986940498978 | bayes_pls_golite062009 |
| transcription repressor activity | 1.45436310356985 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.25569054667398 | bayes_pls_golite062009 |
| protein binding | 1.17425096415314 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.913784026677934 | bayes_pls_golite062009 |
| transcription activator activity | 0.760275666958713 | bayes_pls_golite062009 |
| transcription factor binding | 0.698609386505727 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.379584332543036 | bayes_pls_golite062009 |
| catalytic activity | 0.201193336576136 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.0806573268112463 | bayes_pls_golite062009 |
|
Region A: Residues: [303-447] |
1 11 21 31 41 51
| | | | | |
1 LPDRDVPWPT FRATSIGRCP FVPETKYRLS TSKSLVAKND QQLLQRQSQE PSLILRANSM 60
61 KASLPDISNT GISGMNTNTT YNTNINNTPQ TAISGITQDT SPSIRTNCHH CLDDGMQASG 120
121 IVQSNLTSAA MSNNSAIRSG SAASV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [448-545] |
1 11 21 31 41 51
| | | | | |
1 PVVTINGRDI AELKKRIIQQ KSGMIGKDYS YKAMLHNTSQ RKIRVDAKPG YCENCREKFD 60
61 NFESHIRSSR HRRFAENNDN FKDLDELFAL VQRPLRPD
|
| Detection Method: | |
| Confidence: | 1.24 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.22191080270855 | bayes_pls_golite062009 |
| DNA binding | 4.12848717389394 | bayes_pls_golite062009 |
| nucleic acid binding | 4.04689255235626 | bayes_pls_golite062009 |
| transcription factor activity | 3.09773531733947 | bayes_pls_golite062009 |
| binding | 2.99742524370422 | bayes_pls_golite062009 |
| transcription repressor activity | 2.89448820920797 | bayes_pls_golite062009 |
| transcription activator activity | 1.89703294042317 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.83572444812059 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.26918933830233 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.26862497534835 | bayes_pls_golite062009 |
| transcription factor binding | 1.2172880494946 | bayes_pls_golite062009 |
| chromatin binding | 1.10179307236186 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.04205834745201 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.983886041616211 | bayes_pls_golite062009 |
| protein binding | 0.952480850696098 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.662695307860787 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.565178169822137 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
| histone binding | 0.088089875173164 | bayes_pls_golite062009 |
