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Protein Overview: SPO6_SCHPO

General Information:
Name(s) found: SPO6_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • Sporulation-specific protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spo6 PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFYSVKSQP FVRSPLVDQN PSIQNINEEV KRDIQNPLSY KTETSDKELC QTAACATSCS  60
   61 DWYPQQQTHM PHQNAFDSAK ATAKMALPPT AFSNYCVKPS LTRNKDIPRT SIRVSKLRYW 120
  121 QRDYRLAFPN FIFYFDNVDE EIKRRVTQKI NNLGAKVATL FTFEVTHFIT TRTTDPEMCQ 180
  181 PNDVLYLSKT ANMKIWLLDK LLNRILFTLL NSDSLVNTSA SCLQSLLDGE KVYGTSDKDF 240
  241 YVPSKNVEYF REYFLCIRDL SQYYKPIAVR EWEKTLDSGE ILWPSLAITA QGRCPFNTGR 300
  301 RRELKITKHN HPAHEIRKQL LSCTNQTNQN NVVKNSASVL VRQIMGDYNI TESAVDGAKQ 360
  361 MPTEFPKPEN LLPVEKRAAM SPLNLLEPRL INKQNTLANQ SPRQPPNAFD ADPLAHKKVK 420
  421 IETKSGYCEN CCERYKDLER HLGGKHHRRF AEKDENFQGL DDLFLLIRRP IRTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..235] FFAS03 1.53 The third BRCA1 C-terminus (BRCT) domain of Similar to S.pombe rad4+/cut5+ product
    3 View Details [236..362] deduced N/A No confident structure predictions are available.
    4 View Details [363..474] MSA 6.028996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.35986940498978 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.23726848385925 bayes_pls_golite062009
  • DNA binding
    		•  1.21803358548345 bayes_pls_golite062009
  • protein binding
    		•  1.17425096415314 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.948550635369826 bayes_pls_golite062009
  • damaged DNA binding
    		•  0.573570505312825 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.253994205417832 bayes_pls_golite062009
  • catalytic activity
    		•  0.201193336576136 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle