| Protein: | cnx1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cnx1.
| Description | E-value | Query Range |
Subject Range |
|
|
648.0 | [0..18] | [482..41] |
|
|
646.0 | [0..18] | [482..41] |
|
|
642.0 | [0..1] | [553..1] |
|
|
639.0 | [0..18] | [481..41] |
|
|
638.0 | [0..18] | [481..41] |
|
|
638.0 | [0..18] | [481..41] |
|
Region A: Residues: [1-438] |
1 11 21 31 41 51
| | | | | |
1 MKYGKVSFLA LLCSLYVRGS LADPESEQEP LVFNPTEVKA PLVEQFQGAW SERWIPSHAK 60
61 RFVNGIEEMS YVGEWTVEES SGPGALKGEA GLVMKDEAAH HAISYEFDEP INEPEKDLVV 120
121 QYEVNPEEGL NCGGAYLKLL AEPTHGEMSN SIDYRIMFGP DKCGVNDRVH FIFKHKNPLT 180
181 GEYSEKHLDS RPASLLKPGI TNLYTLIVKP DQTFEVRING DVVRQGSLFY DFIPPVLPPV 240
241 EIYDPEDIKP ADWVDEPEIP DPNAVKPDDW DEDAPRMIPD PDAVKPEDWL EDEPLYIPDP 300
301 EAQKPEDWDD EEDGDWIPSE IINPKCIEGA GCGEWKPPMI RNPNYRGPWS PPMIPNPEFI 360
361 GEWYPRKIPN PDYFDDDHPS HFGPLYGVGF ELWTMQPNIR FSNIYVGHSI EDAERLGNET 420
421 FLPKLKAERE LLSKQESM
|
| Detection Method: |  |
| Confidence: | 166.0 |
| Match: | 1jhnA |
| Description: | Calnexin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| complement component C1q binding | 4.81971897425786 | bayes_pls_golite062009 |
| steroid hormone receptor binding | 4.11346029337178 | bayes_pls_golite062009 |
| androgen receptor binding | 3.88449123711676 | bayes_pls_golite062009 |
| zymosan binding | 3.41405218556083 | bayes_pls_golite062009 |
| nuclear hormone receptor binding | 3.3517714661273 | bayes_pls_golite062009 |
| binding | 3.24845777545007 | bayes_pls_golite062009 |
| hormone receptor binding | 3.2405597896178 | bayes_pls_golite062009 |
| structural molecule activity | 3.0286932947016 | bayes_pls_golite062009 |
| unfolded protein binding | 2.94586353433162 | bayes_pls_golite062009 |
| protein binding | 2.62442480878692 | bayes_pls_golite062009 |
| transcription regulator activity | 2.5786381493734 | bayes_pls_golite062009 |
| transcription repressor activity | 2.42862869142896 | bayes_pls_golite062009 |
| nucleic acid binding | 2.33705817770533 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.16616430987996 | bayes_pls_golite062009 |
| actin binding | 2.0669297251683 | bayes_pls_golite062009 |
| DNA binding | 2.05388036301171 | bayes_pls_golite062009 |
| carbohydrate binding | 1.90829797790335 | bayes_pls_golite062009 |
| sugar binding | 1.89824804892868 | bayes_pls_golite062009 |
| receptor binding | 1.70102429470678 | bayes_pls_golite062009 |
| molecular transducer activity | 1.69567186252006 | bayes_pls_golite062009 |
| signal transducer activity | 1.69567186252006 | bayes_pls_golite062009 |
| cation binding | 1.67588357161378 | bayes_pls_golite062009 |
| metal ion binding | 1.67588357161378 | bayes_pls_golite062009 |
| ion binding | 1.66900324045723 | bayes_pls_golite062009 |
| NACHT domain binding | 1.53382521801494 | bayes_pls_golite062009 |
| integrin binding | 1.36513827550387 | bayes_pls_golite062009 |
| transporter activity | 1.29150662073327 | bayes_pls_golite062009 |
| chaperone binding | 1.28860282614448 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.25720635817943 | bayes_pls_golite062009 |
| protein complex binding | 1.23240411516711 | bayes_pls_golite062009 |
| RNA binding | 1.22339134958708 | bayes_pls_golite062009 |
| heparin binding | 1.15897181987617 | bayes_pls_golite062009 |
| transcription factor activity | 1.15427978494805 | bayes_pls_golite062009 |
| transcription activator activity | 1.11465354227601 | bayes_pls_golite062009 |
| polysaccharide binding | 1.09475063562581 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07075219961504 | bayes_pls_golite062009 |
| receptor activity | 0.946182305131481 | bayes_pls_golite062009 |
| growth factor activity | 0.850395354506359 | bayes_pls_golite062009 |
| pattern binding | 0.83687933614214 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.814690646803591 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.801327928563072 | bayes_pls_golite062009 |
| mRNA binding | 0.67699218614597 | bayes_pls_golite062009 |
| monosaccharide binding | 0.5678336426881 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.546870122670733 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.52360080681204 | bayes_pls_golite062009 |
| calcium ion binding | 0.416416901481401 | bayes_pls_golite062009 |
| hydrolase activity | 0.374282208763552 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.160855218996334 | bayes_pls_golite062009 |
| growth factor binding | 0.0922754536898114 | bayes_pls_golite062009 |
| cytokine binding | 0.0273545648165503 | bayes_pls_golite062009 |
|
Region A: Residues: [439-560] |
1 11 21 31 41 51
| | | | | |
1 EKQSMHVDEE SNQILEKFLD VYDIIKAKLP PNVAEKVDYY VETIIETPEI GIAIVAVLGS 60
61 LTAVILTCYF YFFASSSPAS LSTGTTEAEK EQQEKFKQET ETEKIDVSYA PETESPTAKN 120
121 ED
|
| Detection Method: | |
| Confidence: | 11.39794 |
| Match: | 1qjtA |
| Description: | Eps15 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.49668552859347 | bayes_pls_golite062009 |
| structural molecule activity | 3.23829457266793 | bayes_pls_golite062009 |
| binding | 3.17556402087346 | bayes_pls_golite062009 |
| actin binding | 2.93015079033749 | bayes_pls_golite062009 |
| metal ion binding | 2.62077305565026 | bayes_pls_golite062009 |
| cation binding | 2.62077305565026 | bayes_pls_golite062009 |
| ion binding | 2.61312132078717 | bayes_pls_golite062009 |
| motor activity | 2.57627414053278 | bayes_pls_golite062009 |
| microfilament motor activity | 2.31015572544973 | bayes_pls_golite062009 |
| transcription regulator activity | 2.23156041569913 | bayes_pls_golite062009 |
| protein binding | 2.21291432166051 | bayes_pls_golite062009 |
| structural constituent of muscle | 2.20727612600932 | bayes_pls_golite062009 |
| nucleic acid binding | 1.83723964306928 | bayes_pls_golite062009 |
| DNA binding | 1.73924929536227 | bayes_pls_golite062009 |
| signal transducer activity | 1.56751504958972 | bayes_pls_golite062009 |
| molecular transducer activity | 1.56751504958972 | bayes_pls_golite062009 |
| myosin binding | 1.52005099664686 | bayes_pls_golite062009 |
| tubulin binding | 1.46254997073304 | bayes_pls_golite062009 |
| peptidase activity | 1.42397628411744 | bayes_pls_golite062009 |
| calcium ion binding | 1.40919295397643 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 1.39855027520112 | bayes_pls_golite062009 |
| actin filament binding | 1.39015845077273 | bayes_pls_golite062009 |
| transcription repressor activity | 1.24311821191924 | bayes_pls_golite062009 |
| transporter activity | 1.15928534291452 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 1.15266823079004 | bayes_pls_golite062009 |
| calcium-dependent protein binding | 1.07190293594284 | bayes_pls_golite062009 |
| microtubule binding | 1.02453072828852 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.945691505472547 | bayes_pls_golite062009 |
| receptor binding | 0.857448001471136 | bayes_pls_golite062009 |
| endopeptidase activity | 0.833336205861396 | bayes_pls_golite062009 |
| G-protein beta/gamma-subunit binding | 0.77824189826064 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.693724160233023 | bayes_pls_golite062009 |
| myosin heavy chain binding | 0.61866037435065 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.45412801027969 | bayes_pls_golite062009 |
| hydrolase activity | 0.275235036575339 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.246383459363256 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.193201281459889 | bayes_pls_golite062009 |
| N-terminal myristoylation domain binding | 0.1721637562785 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.116648335890738 | bayes_pls_golite062009 |
| gated channel activity | 0.0709126830279607 | bayes_pls_golite062009 |
| actin monomer binding | 0.0701886284348601 | bayes_pls_golite062009 |
| protein complex binding | 0.0676093357928913 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0305250212662123 | bayes_pls_golite062009 |
