| Protein: | FBpp0310174, mei... |
| Organism: | Drosophila melanogaster |
| Length: | 961 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310174, mei....
| Description | E-value | Query Range |
Subject Range |
|
|
601.0 | [0..1] | [947..1] |
|
Region A: Residues: [1-602] |
1 11 21 31 41 51
| | | | | |
1 MADSCAENAA KGTENERPKE VEASADTVPQ VEEGVEEYLK RKNMVLLDYE KQMFLDLVEA 60
61 DGLLVCAKGL SYDRVVISIL KAYSDSGNLV LVINSSDWEE QYYKSKIEPK YVHEVASTAT 120
121 ERERVYLEGG LQFISTRILV VDLLKQRIPI ELISGIIVLR AHTIIESCQE AFALRLFRQK 180
181 NKTGFVKAFS SSPEAFTIGY SHVERTMRNL FVKHLYIWPR FHESVRTVLQ PWKIQSIEMH 240
241 VPISQNITSI QSHILEIMNF LVQEIKRINR TVDMEAVTVE NCVTKSFHKI LQAQLDCIWH 300
301 QLNSQTKLIV ADLKILRSLM ISTMYHDAVS AYAFMKRYRS TEYALSNSGW TLLDAAEQIF 360
361 KLSRQRVFNG QQEFEPEPCP KWQTLTDLLT KEIPGDMRRS RRSEQQPKVL ILCQDARTCH 420
421 QLKQYLTQGG PRFLLQQALQ HEVPVGKLSD NYAKESQTRS APPKNVSSNK ELRREEVSGS 480
481 QPPLAGMDEL AQLLSESETE GQHFEESYML TMTQPVEVGP AAIDIKPDPD VSIFETIPEL 540
541 EQFDVTAALA SVPHQPYICL QTFKTEREGS MALEHMLEQL QPHYVVMYNM NVTAIRQLEV 600
601 FE
|
| Detection Method: |  |
| Confidence: | 64.522879 |
| Match: | 1wp9A |
| Description: | Crystal structure of Pyrococcus furiosus Hef helicase domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [603-670] |
1 11 21 31 41 51
| | | | | |
1 ARRRLPPADR MKVYFLIHAR TVEEQAYLTS LRREKAAFEF IIDTKSKMVI PKYQDGKTDE 60
61 AFLLLKTY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [671-961] |
1 11 21 31 41 51
| | | | | |
1 DDEPTDENAK SRQAGGQAPQ ATKETPKVIV DMREFRSDLP CLIHKRGLEV LPLTITIGDY 60
61 ILTPDICVER KSISDLIGSL NSGRLYNQCV QMQRHYAKPI LLIEFDQNKP FHLQGKFMLS 120
121 QQTSMANADI VQKLQLLTLH FPKLRLIWSP SPYATAQLFE ELKLGKPEPD PQTAAALGSD 180
181 EPTAGEQLHF NSGIYDFLLR LPGVHTRNIH GLLRKGGSLR QLLLRSQKEL EELLQSQESA 240
241 KLLYDILHVA HLPEKDEVTG STALLAASKQ FGAGSHNRFR MAAAASRRGR R
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 2bgwA |
| Description: | XPF from Aeropyrum pernix, complex with DNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| single-stranded DNA specific endodeoxyribonuclease activity | 12.5797089932289 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 7.65460057398582 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 6.8949486660401 | bayes_pls_golite062009 |
| endonuclease activity | 6.81743235298471 | bayes_pls_golite062009 |
| four-way junction helicase activity | 4.48421726286311 | bayes_pls_golite062009 |
| DNA helicase activity | 4.45575761476577 | bayes_pls_golite062009 |
| DNA strand annealing activity | 3.51692202399009 | bayes_pls_golite062009 |
| excinuclease ABC activity | 3.48615352002265 | bayes_pls_golite062009 |
| single-stranded DNA binding | 3.44605832131927 | bayes_pls_golite062009 |
| structure-specific DNA binding | 3.37084035853131 | bayes_pls_golite062009 |
| damaged DNA binding | 2.98078816242626 | bayes_pls_golite062009 |
| DNA binding | 2.97855002479178 | bayes_pls_golite062009 |
| helicase activity | 2.83648239124034 | bayes_pls_golite062009 |
| nucleic acid binding | 2.79236389919005 | bayes_pls_golite062009 |
| nuclease activity | 2.20113675721212 | bayes_pls_golite062009 |
| binding | 2.17324322139334 | bayes_pls_golite062009 |
| hydrolase activity | 2.07039693890326 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.69645042781713 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.26255690081743 | bayes_pls_golite062009 |
| transposase activity | 1.10140160488189 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.05548921907953 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.02983374615445 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.01049916010827 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.00920723797259 | bayes_pls_golite062009 |
| catalytic activity | 0.816447099398022 | bayes_pls_golite062009 |
| protein binding | 0.71091195096997 | bayes_pls_golite062009 |
