| Protein: | FBpp0303995, dm-PA |
| Organism: | Drosophila melanogaster |
| Length: | 717 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0303995, dm-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
570.0 | [0..1] | [717..1] |
|
Region A: Residues: [1-191] |
1 11 21 31 41 51
| | | | | |
1 MALYRSDPYS IMDDQLFSNI SIFDMDNDLY DMDKLLSSST IQSDLEKIED MESVFQDYDL 60
61 EEDMKPEIRN IDCMWPAMSS CLTSGNGNGI ESGNSAASSY SETGAVSLAM VSGSTNLYSA 120
121 YQRSQTTDNT QSNQQHVVNS AENMPVIIKK ELADLDYTVC QKRLRLSGGD KKSQIQDEVH 180
181 LIPPGGSLLR K
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [192-324] |
1 11 21 31 41 51
| | | | | |
1 RNNQDIIRKS GELSGSDSIK YQRPDTPHSL TDEVAASEFR HNVDLRACVM GSNNISLTGN 60
61 DSDVNYIKQI SRELQNTGKD PLPVRYIPPI NDVLDVLNQH SNSTGGQQQL NQQQLDEQQQ 120
121 AIDIATGRNT VDS
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 2ii0A |
| Description: | No description for 2ii0A was found. |
|
Region A: Residues: [325-508] |
1 11 21 31 41 51
| | | | | |
1 PPTTGSDSDS DDGEPLNFDL RHHRTSKSGS NASITTNNNN SNNKNNKLKN NSNGMLHMMH 60
61 ITDHSYTRCN DMVDDGPNLE TPSDSDEEID VVSYTDKKLP TNPSCHLMGA LQFQMAHKIS 120
121 IDHMKQKPRY NNFNLPYTPA SSSPVKSVAN SRYPSPSSTP YQNCSSASPS YSPLSVDSSN 180
181 VSSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [509-587] |
1 11 21 31 41 51
| | | | | |
1 SSSSSSQSSF TTSSSNKGRK RSSLKDPGLL ISSSSVYLPG VNNKVTHSSM MSKKSRGKKV 60
61 VGTSSGNTSP ISSGQDVDA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [588-717] |
1 11 21 31 41 51
| | | | | |
1 MDRNWQRRSG GIATSTSSNS SVHRKDFVLG FDEADTIEKR NQHNDMERQR RIGLKNLFEA 60
61 LKKQIPTIRD KERAPKVNIL REAAKLCIQL TQEEKELSMQ RQLLSLQLKQ RQDTLASYQM 120
121 ELNESRSVSG
|
| Detection Method: | |
| Confidence: | 23.154902 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| transcription activator activity | 3.87875547821718 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.42035985454056 | bayes_pls_golite062009 |
| protein binding | 2.64975291677725 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.48787404513864 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.44519817693888 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.07771706364343 | bayes_pls_golite062009 |
| transcription repressor activity | 0.955588849035129 | bayes_pls_golite062009 |
| promoter binding | 0.94414084000081 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.93846047598021 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.801830750183111 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.53175615551166 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.3513586903977 | bayes_pls_golite062009 |
| protein dimerization activity | 0.20674648626116 | bayes_pls_golite062009 |
