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View Structure Prediction Details

Protein: Fur1-PA
Organism: Drosophila melanogaster
Length: 1101 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fur1-PA.

Description E-value Query
Range
Subject
Range
gi|157242 - gi|157242|gb|AAA28467.1| dKLIP-1
703.0 [0..1] [1101..1]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNDVVRWSR QPTSNTTNSS SSSRSDSNST HKHRSKSNKL NARQLGSNAA RSCQQRSSVA  60
   61 TTLEDEQQTI IECDIGNFNF DCNLFKTSFL TQHKQKRSGK SSSKSKSNRS RPLAKTKAVF 120
  121 LLALQFSAVV FLCNINVGFV AGSVATAASS AGGSSPAAPS SAPSSPPTV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVPPPPPPSS ALKVDPNGQS PVLPPYVLDY ETGGKAKLTP NNGKFGQSGS SGSNNNHIVG  60
   61 HYTHTWAVHI PNGDNGMADA VAKDHGFVNL GKIFDDHYHF AHHKVSKRSL SPATHHQTRL 120
  121 DDDDRVHWAK QQRAKSRSKR DFIRMRPSRT SSRAMSMVDA MSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.522879
Match: 1t1eA
Description: High Resolution Crystal Structure of the Intact Pro-Kumamolisin, a Sedolisin Type Proteinase (previously called Kumamolysin or KSCP)
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [333-787]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDSKWPQMWY LNRGGGLDMN VIPAWKMGIT GKGVVVTILD DGLESDHPDI QDNYDPKASY  60
   61 DVNSHDDDPM PHYDMTDSNR HGTRCAGEVA ATANNSFCAV GIAYGASVGG VRMLDGDVTD 120
  121 AVEARSLSLN PQHIDIYSAS WGPDDDGKTV DGPGELASRA FIEGTTKGRG GKGSIFIWAS 180
  181 GNGGREQDNC NCDGYTNSIW TLSISSATEE GHVPWYSEKC SSTLATTYSS GGQGEKQVVT 240
  241 TDLHHSCTVS HTGTSASAPL AAGIAALVLQ SNQNLTWRDL QHIVVRTAKP ANLKDPSWSR 300
  301 NGVGRRVSHS FGYGLMDAAE MVRVARNWKA VPEQQRCEIN APHVDKVIPP RTHITLQLTV 360
  361 NHCRSVNYLE HVQAKITLTS QRRGDIQLFL RSPANTSVTL LTPRIHDNSR SGFNQWPFMS 420
  421 VHTWGESPQG NWQLEIHNEG RYMAQITQWD MIFYG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.69897
Match: 1p8jA
Description: Furin, C-terminal domain; Furin, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nerve growth factor binding 5.17216805931457 bayes_pls_golite062009
peptidase activity 4.77677490610016 bayes_pls_golite062009
neurotrophin binding 4.47215080222714 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 4.40501322467328 bayes_pls_golite062009
serine hydrolase activity 4.30899317351154 bayes_pls_golite062009
serine-type peptidase activity 4.29545891350519 bayes_pls_golite062009
endopeptidase activity 3.83336601331518 bayes_pls_golite062009
serine-type endopeptidase activity 3.71508033196614 bayes_pls_golite062009
hydrolase activity 2.1123944590511 bayes_pls_golite062009
eukaryotic cell surface binding 1.50287724152407 bayes_pls_golite062009
binding 1.08901362883653 bayes_pls_golite062009
catalytic activity 0.597535457699629 bayes_pls_golite062009
exopeptidase activity 0.42083764849682 bayes_pls_golite062009
protein binding 0.380935140681308 bayes_pls_golite062009
receptor binding 0.222369968782666 bayes_pls_golite062009
glycosaminoglycan binding 0.22219445619715 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [788-1101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TETPAQPDDV ANPSQSNQFN LYGNDMAHND VEYDSTGQWR NMQQVGEVGM TRDHSNTAAC  60
   61 LKWSDRKCLE CNDSAYMFED QCYDVCPVHT YPLDKFQAEE DEQDDEVTRG PVNPYSSSPM 120
  121 DHSLLMSNSL DDKQDPLQAE DRRRRSSLTQ LVEVPSRVCA ACDRSCLECY GALASQCSTC 180
  181 SPGSQLRKIL NETFCYAYVV RSTGMASVVD ISKMDDRDTQ QYMTGTTVLL LVSVIFTLMG 240
  241 VAVAGGIVYH RRAMARSNEL YSRVSLVPGD ESDSDEDELF TAHFPARKSG VNIYRDEAPS 300
  301 EKIFEEDEIS HLVP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.30103
Match: 1n7dA
Description: Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
receptor binding 3.29563208013266 bayes_pls_golite062009
growth factor activity 2.98754787930869 bayes_pls_golite062009
ErbB-2 class receptor binding 2.47588813698806 bayes_pls_golite062009
binding 2.35148208532935 bayes_pls_golite062009
ErbB-3 class receptor binding 1.91029895687059 bayes_pls_golite062009
protein binding 1.87564165872234 bayes_pls_golite062009
glycosaminoglycan binding 1.69932456942774 bayes_pls_golite062009
heparin binding 1.31822233987881 bayes_pls_golite062009
transcription regulator activity 1.02533871020185 bayes_pls_golite062009
pattern binding 0.889457267222739 bayes_pls_golite062009
extracellular matrix structural constituent 0.87690248187077 bayes_pls_golite062009
transcription factor binding 0.84948501276694 bayes_pls_golite062009
polysaccharide binding 0.815272766842889 bayes_pls_golite062009
epidermal growth factor receptor binding 0.78842039074146 bayes_pls_golite062009
transcription cofactor activity 0.77044611170692 bayes_pls_golite062009
signal transducer activity 0.600269003770368 bayes_pls_golite062009
molecular transducer activity 0.600269003770368 bayes_pls_golite062009
carbohydrate binding 0.0269430386148981 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle