| Protein: | FBpp0307575, cdm-PA |
| Organism: | Drosophila melanogaster |
| Length: | 971 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307575, cdm-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
423.0 | [0..1] | [971..1] |
|
Region A: Residues: [1-971] |
1 11 21 31 41 51
| | | | | |
1 MEPIDIARLE EAVVSFYRSN SQNQAITHEW LTDAEASPQA WQFSWQLMQL GKSQEVQFFG 60
61 AITLHSKLMK HWHEVPPENR EELKQKILES IVRFAGGPKI VLNRLCISLG AYIVHMLGEW 120
121 PGAIEEVINT FQNQRMPNVS ADVQLWIMLE VLTAIPEEAQ VIHTSVKRVV LRAEIAKRVQ 180
181 LVIHTVERYL KLQMNRVWDA EAYSNMNRAV KCVGTWIKNI GYTIEGCVTI TAVLLEVVHK 240
241 CYWPCIHAGD GCMTADENEL AESCLKTMVN IIIQPDCHNY PKTAFVLIKM FLDSLSEITK 300
301 TEWKRENDNE DIIVHIYMLF VSSVERHSTL LLSGITSADP ELSILVHRIV QEILHCTDKP 360
361 GIYPVEESCS TMALAFWYML QDEVFAMSND EQKHKCWEYI KPLYAHLTRI LVRKSEQPDE 420
421 KSLAKWSSDD LECFRCYRQD ISDTFMYCYD VLNDYILEIL AAMLDEAIAD LQRHPTHWTK 480
481 LEACIYSFQS VAEHFGGEEK RQIPRLMRVL AEIPYEKLNV KLLGTALETM GSYCNWLMEN 540
541 PAYIPPAINL LVRGLNSSMS AQATLGLKEL CRDCQLQLKP YADPLLNACH ASLNTGRMKN 600
601 SDSVRLMFSI GKLMSLLRPE EIPKYLDIIV SPCFEELQAI CQADSKTPAA RIRTIFRLNM 660
661 ISTLFSSLNT DVDEQATDQP IVQPVLLVMQ RTMPIFKRIA EMWVEEIDVL EAACSAMKHA 720
721 ITNLRSSFQP MLQDLCLFIV ASFQTRCCAP TLEISKTAIV MFFKDEGCKP LMQQLLREFI 780
781 QHSFKLFEST PEQNFSNISD TMETFFGCLT QIIKKIPQVL EDKTLAYDRL VFYAQRGMTL 840
841 PESGAIRNSI QFLTHFVMQS RNHAHVTEVV LATGEQTLYT AMMCVGYLTP RSQVDKFADI 900
901 LLAMNRKYAA EMAVWMKSLM STPNFPTQLI TDADKTRYTA LIIKEKVNKR LLQQHLSEMA 960
961 MKTRGLTEKF Q
|
| Detection Method: |  |
| Confidence: | 86.69897 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 3.37337719451433 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| nucleic acid binding | 2.74745843355294 | bayes_pls_golite062009 |
| RNA binding | 2.62683106046883 | bayes_pls_golite062009 |
| transporter activity | 1.96378463119414 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| transcription regulator activity | 1.90912542848632 | bayes_pls_golite062009 |
| DNA binding | 1.77040152722002 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.65364344577652 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 1.4515576307774 | bayes_pls_golite062009 |
| transcription factor activity | 1.27944481949335 | bayes_pls_golite062009 |
| mRNA binding | 1.24616647164637 | bayes_pls_golite062009 |
| RNA cap binding | 0.85485270555676 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.722899877678394 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 0.501965300276747 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.439826552150332 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| transcription activator activity | 0.0797305392056347 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| transcription factor binding | 0.00210118982863072 | bayes_pls_golite062009 |
