| Protein: | mor-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1209 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mor-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1049.0 | [0..6] | [1079..32] |
|
Region A: Residues: [1-236] |
1 11 21 31 41 51
| | | | | |
1 MNTLGPKKDG SPNIDFFQSP ETLQGFESIR QWLQKNCKKY LAHSSEPITK ESLAQLLIHF 60
61 LQYVEAKLGK NSADPPATRI PMRCFLDFKS GGGLCIIFST MFRFRAEQRG KKFDFSIGKN 120
121 PTRKDPNIQL LIEIEQALVE ADLYRIPYIY IRPEIEKGFE GKLREILDNR RVEIVSDEED 180
181 ATHIVYPVVD PHPDEYARPI FKRGGHVMLH WYYFPESYDS WAVNNFDLPD HIPENP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [237-337] |
1 11 21 31 41 51
| | | | | |
1 ESPAERWRVS ASWIVDLEQY NEWMAEEDYE VDEQGKKKTH KQRMSIDDIM SFGDEKKKPA 60
61 ASSGGGKQKR RRSPSPASSA STSKPGKRKR SPAVVHKKSR N
|
| Detection Method: | |
| Confidence: | 11.522879 |
| Match: | 2cu7A |
| Description: | Solution structure of the SANT domain of human KIAA1915 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.5139760613123 | bayes_pls_golite062009 |
| transcription activator activity | 3.10621734076555 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.26183812259792 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| protein binding | 1.88087411289001 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.40149699217445 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.40149699217445 | bayes_pls_golite062009 |
| protein deacetylase activity | 1.23680480131205 | bayes_pls_golite062009 |
| histone deacetylase activity | 1.18932416576802 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.14886080629275 | bayes_pls_golite062009 |
| chromatin binding | 1.04132983826241 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.810065362108106 | bayes_pls_golite062009 |
| histone binding | 0.557787598121402 | bayes_pls_golite062009 |
| deacetylase activity | 0.530687254192222 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.2679415219517 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.25931464844298 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.212884313176726 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 0.13444271681002 | bayes_pls_golite062009 |
|
Region A: Residues: [338-409] |
1 11 21 31 41 51
| | | | | |
1 DDDDEDLTRD LDDPPAEPNV QEVHKANAAL QSTASPAPGG KSRGDNDMMP IKGGTMTDLD 60
61 DEMTGGSAAQ AM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [410-542] |
1 11 21 31 41 51
| | | | | |
1 STGDGENSQT GKTSDNSNTQ EFSSSAKEDM EDNVTEQTHH IIVPSYSAWF DYNSIHVIEK 60
61 RAMPEFFNSK NKSKTPEIYM AYRNFMIDTY RLNPTEYLTS TACRRNLAGD VCAIMRVHAF 120
121 LEQWGLINYQ IDA
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 2fq3A |
| Description: | Structure and function of the SWIRM domain, a conserved protein module found in chromatin regulatory complexes |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [543-649] |
1 11 21 31 41 51
| | | | | |
1 DVRPTPMGPP PTSHFHILSD TPSGLQSINP QKTQQPSAAK TLLDLDKKPL GKDGGLELGD 60
61 KSGLTGIKTE ALENGAAGGL SSGVSQFGLK LDQYAKKPAA MRNRTAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [650-763] |
1 11 21 31 41 51
| | | | | |
1 SMAREWTDQE TLLLLEGLEM HKDDWNKVCE HVGSRTQDEC ILHFLRLPIE DPYLEDDGGF 60
61 LGPLACQPIP FSKSGNPIMS TVAFLASVVD PRVAAAAAKA AMEEFAAIKD EVPA
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 2elkA |
| Description: | No description for 2elkA was found. |
|
Region A: Residues: [764-829] |
1 11 21 31 41 51
| | | | | |
1 TIMDNHLKNV EKASAGGKFN PNFGLANSGI AGTGNDKDDE EGKEGGASAS AGGSDEEMKD 60
61 LSKKDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [830-1209] |
1 11 21 31 41 51
| | | | | |
1 DAKSKDNTKS DKTNTNTDSS STSSSATGNT NNTDKKPKES SGSSPSGDKS AIKSDKSNKS 60
61 SPTETAAAAS GGEVDIKTED SSGDGETKDG TEAKEGTGTG TGPLAVPKEG TFSENNMQTA 120
121 AAAALASAAV KAKHLAALEE RKIKSLVALL VETQMKKLEI KLRHFEELEA TMEREREGLE 180
181 YQRQQLITER QQFHLEQLKA AEFRARQQAH HRLQQELQGQ AAAGSMILPQ QQQLPQAQQP 240
241 QQQQQTLPPH PHLAQQQQLP PHPHQLPPQS QPLAGPTAQH QPLPPHVVSS PNGAPFAAPP 300
301 ISLTGGLPPG APTAIVTNPS DQTGPVAAGA AQSQAPTPMD TTPPSSGPVS DANAPPGSAM 360
361 PPGGIPPANT APIAGVAPSS
|
| Detection Method: | |
| Confidence: | 11.522879 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
