| Protein: | FBpp0306662, rec-PA |
| Organism: | Drosophila melanogaster |
| Length: | 885 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306662, rec-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
537.0 | [0..65] | [882..20] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MNPTLSRGGA PSRFVRGRGR GGGAYRPYFY FRRNGRVIPA GGNRQPNQGE PGAPDAPSVP 60
61 PATRQPRGWS RTAGKRGRNA HLDCSFLRPE NYAAPEDGLQ VQSIAVDNPR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [111-269] |
1 11 21 31 41 51
| | | | | |
1 AYSGWRLYFL REKYEEGNEL ATRIMAVEAY YQRNPHTFDF VMIRDRGFFP LCAAGIKSDA 60
61 QLKEVWPSLS EDIREHPLRT LGTLSLAMHT VVVNHQLDCN DSTTAMVSTP EQYVLPTPRV 120
121 RKIYARPDDF VPVESIEGIS HSRVDTLFSI RGFVSNVGE
|
| Detection Method: | |
| Confidence: | 40.39794 |
| Match: | 1ltlA |
| Description: | DNA replication initiator (cdc21/cdc54) N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [270-703] |
1 11 21 31 41 51
| | | | | |
1 PSYSLTWQAF RCSRCQMEIA MRQRGTFQPR PYQCKRSECV ARDEFVPLRS SPYTRLSIRQ 60
61 IIRVEESSLN LVHDFETSMP AEMDVELRHD LVDAVRVGQE VVVTGILKLQ ELGDDTTTGD 120
121 TSNQMQPYLK AVSIRDASSI KREFSERDLE AIVMINAEPN SFKLLVQSIA PEVYGHELPK 180
181 AACLLSLLGG KGAETEAINV LLVGDPGIGK TKILQSCAQI AERGAHVSGK RGAQSAQQLG 240
241 VTFAGRNKRV LQAGSLMMAS GGGHCTLDDV DKLASKQAVL LQCLQSEEVN LPLAGAFASF 300
301 PAQPSVIACA NPQRGQYDEG RYLLQNINIS PSLLREFHLV YILLDKPSER DMSLTAHVRA 360
361 LHAGARKRAR IAARYALKPK MSDSMCEVSL NVPAAGKDDD TIKTEDDNDS IMQQDYDLDK 420
421 RLEVLPEEGD LDLL
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1ksfX |
| Description: | N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone; ClpA, an Hsp100 chaperone, AAA+ modules |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 3.94645534451735 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 3.91355858456767 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| binding | 2.05253348982328 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.04806869603661 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| microtubule motor activity | 1.6537049553461 | bayes_pls_golite062009 |
| nucleic acid binding | 1.49633029954726 | bayes_pls_golite062009 |
| motor activity | 1.32129340699286 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA binding | 0.967303417236485 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.795745617990735 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.782430219754236 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.771854032852428 | bayes_pls_golite062009 |
| transcription regulator activity | 0.748437190903548 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.6071273686445 | bayes_pls_golite062009 |
| protein binding | 0.508848095576342 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.367559137329714 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.0763022821830703 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0530667986761242 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.028470639373934 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.0265151533232588 | bayes_pls_golite062009 |
|
Region A: Residues: [704-885] |
1 11 21 31 41 51
| | | | | |
1 PPILIKKFLS YARQELNPVL NEDASNAVLR YFLELKGSCN LDEDVSSQIG AGQLLAIIHL 60
61 SQARARLDLS HVVSPQHVRD VIALLTESIT QTSLKEGSSR QGTRGGGGAG GGAGKSAQLR 120
121 NFLELTKRRS AALGRRIFEF DELKEIGTRA GILTGFSQLV EMANLGGYLL MKGANMYEVV 180
181 PD
|
| Detection Method: | |
| Confidence: | 57.30103 |
| Match: | 2ce7A |
| Description: | EDTA treated |
Matching Structure (courtesy of the PDB): |
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