| Protein: | mus308-PA |
| Organism: | Drosophila melanogaster |
| Length: | 2059 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mus308-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1393.0 | [0..1] | [2059..1] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MAFSQSFNFG NSTLMALEKG MQADDKENAQ PGNGNIQVQS AGNEVNSEIQ EINSEFFRDE 60
61 FSYEVNQAHK PAEQSVVNVS QVQQHMAVVS NQDSEDQSRS SALNDQICTQ SSFEGEDAGA 120
121 DAVLDQPNLD ENSFLCPA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-208] |
1 11 21 31 41 51
| | | | | |
1 QDEEASEQLK EDILHSHSVL AKQEFYQEIS QVTQNLSSMS PNQLRVSPNS SRIREAMPER 60
61 PAMPLDLNTL
|
| Detection Method: | |
| Confidence: | 71.154902 |
| Match: | 2db3A |
| Description: | No description for 2db3A was found. |
|
Region A: Residues: [209-1040] |
1 11 21 31 41 51
| | | | | |
1 RSISAWNLPM SIQAEYKKKG VVDMFDWQVE CLSKPRLLFE HCNLVYSAPT SAGKTLVSEI 60
61 LMLKTVLERG KKVLLILPFI SVVREKMFYM QDLLTPAGYR VEGFYGGYTP PGGFESLHVA 120
121 ICTIEKANSI VNKLMEQGKL ETIGMVVVDE VHLISDKGRG YILELLLAKI LYMSRRNGLQ 180
181 IQVITMSATL ENVQLLQSWL DAELYITNYR PVALKEMIKV GTVIYDHRLK LVRDVAKQKV 240
241 LLKGLENDSD DVALLCIETL LEGCSVIVFC PSKDWCENLA VQLATAIHVQ IKSETVLGQR 300
301 LRTNLNPRAI AEVKQQLRDI PTGLDGVMSK AITYACAFHH AGLTTEERDI IEASFKAGAL 360
361 KVLVATSTLS SGVNLPARRV LIRSPLFGGK QMSSLTYRQM IGRAGRMGKD TLGESILICN 420
421 EINARMGRDL VVSELQPITS CLDMDGSTHL KRALLEVISS GVANTKEDID FFVNCTLLSA 480
481 QKAFHAKEKP PDEESDANYI NDALDFLVEY EFVRLQRNEE RETAVYVATR LGAACLASSM 540
541 PPTDGLILFA ELQKSRRSFV LESELHAVYL VTPYSVCYQL QDIDWLLYVH MWEKLSSPMK 600
601 KVGELVGVRD AFLYKALRGQ TKLDYKQMQI HKRFYIALAL EELVNETPIN VVVHKYKCHR 660
661 GMLQSLQQMA STFAGIVTAF CNSLQWSTLA LIVSQFKDRL FFGIHRDLID LMRIPDLSQK 720
721 RARALFDAGI TSLVELAGAD PVELEKVLYN SISFDSAKQH DHENADEAAK RNVVRNFYIT 780
781 GKAGMTVSEA AKLLIGEARQ FVQHEIGLGT IKWTQTQAGV EIASRAIHDG GE
|
| Detection Method: | |
| Confidence: | 91.39794 |
| Match: | 2p6rA |
| Description: | No description for 2p6rA was found. |
| Term | Confidence | Notes |
| catalytic activity | 1.37148167194523 | bayes_pls_golite062009 |
| hydrolase activity | 1.18412998130788 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.16998111465319 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.16375481834344 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.15942143195918 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.15882580213621 | bayes_pls_golite062009 |
| binding | 0.712909626033412 | bayes_pls_golite062009 |
| ATPase activity | 0.62253664120117 | bayes_pls_golite062009 |
| helicase activity | 0.00674361801283974 | bayes_pls_golite062009 |
|
Region A: Residues: [1041-1132] |
1 11 21 31 41 51
| | | | | |
1 VDLHMSLEEE QPPVKRKLSI EENGTANSQK NPRLETVVDT QRGYKVDKNI ANQSKMNPNL 60
61 KEIDAQNKAR RNSTAHMDNL NPISNDPCQN NV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1133-1264] |
1 11 21 31 41 51
| | | | | |
1 NVKTAQPIIS NLNDIQKQGS QIEKMKINPA TVVCSPQLAN EEKPSTSQSA RRKLVNEGMA 60
61 ERRRVALMKI QQRTQKENQS KDQPIQASRS NQLSSPVNRT PANRWTQSEN PNNEMNNSQL 120
121 PRRNPRNQSP VP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1265-1448] |
1 11 21 31 41 51
| | | | | |
1 NANRTASRKV SNAEEDLFMA DDSFMLNTGL AAALTAAESK IASCTEADVI PSSQPKEPEV 60
61 IGALTPHASR LKRSDQLRSQ RIQSPSPTPQ REIEIDLESK NESNGVSSME ISDMSMENPL 120
121 MKNPLHLNAS HIMSCSKVDE TASSFSSIDI IDVCGHRNAF QAAIIEINNA TRLGFSVGLQ 180
181 AQAG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1449-2059] |
1 11 21 31 41 51
| | | | | |
1 KQKPLIGSNL LINQVAAAEN REAAARERVL FQVDDTNFIS GVSFCLADNV AYYWNMQIDE 60
61 RAAYQGVPTP LKVQELCNLM ARKDLTLVMH DGKEQLKMLR KAIPQLKRIS AKLEDAKVAN 120
121 WLLQPDKTVN FLNMCQTFAP ECTGLANLCG SGRGYSSYGL DTSSAILPRI RTAIESCVTL 180
181 HILQGQTENL SRIGNGDLLK FFHDIEMPIQ LTLCQMELVG FPAQKQRLQQ LYQRMVAVMK 240
241 KVETKIYEQH GSRFNLGSSQ AVAKVLGLHR KAKGRVTTSR QVLEKLNSPI SHLILGYRKL 300
301 SGLLAKSIQP LMECCQADRI HGQSITYTAT GRISMTEPNL QNVAKEFSIQ VGSDVVHISC 360
361 RSPFMPTDES RCLLSADFCQ LEMRILAHMS QDKALLEVMK SSQDLFIAIA AHWNKIEESE 420
421 VTQDLRNSTK QVCYGIVYGM GMRSLAESLN CSEQEARMIS DQFHQAYKGI RDYTTRVVNF 480
481 ARSKGFVETI TGRRRYLENI NSDVEHLKNQ AERQAVNSTI QGSAADIAKN AILKMEKNIE 540
541 RYREKLALGD NSVDLVMHLH DELIFEVPTG KAKKIAKVLS LTMENCVKLS VPLKVKLRIG 600
601 RSWGEFKEVS V
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1dpiA |
| Description: | STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nuclease activity | 1.81796593394339 | bayes_pls_golite062009 |
| exonuclease activity | 1.64964907710028 | bayes_pls_golite062009 |
| catalytic activity | 1.62277843225829 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.58702937619673 | bayes_pls_golite062009 |
| hydrolase activity | 1.41857676124086 | bayes_pls_golite062009 |
| ribonuclease activity | 0.71352601607444 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.63299586096139 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.62821439153618 | bayes_pls_golite062009 |
| endonuclease activity | 0.150927275899469 | bayes_pls_golite062009 |
