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View Structure Prediction Details

Protein: Sbf-PA
Organism: Drosophila melanogaster
Length: 1993 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sbf-PA.

Description E-value Query
Range
Subject
Range
Sbf-PB - The gene SET domain binding factor is referred to in FlyBase by the symbol Dmel\Sbf (CG6939, FBgn002...
1908.0 [0..1] [1993..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLADYFVI VGYDSDKEKT ASNVGGQPTC GKIVQRFPEK DWPDTPFIEG IEWFCQPLGW  60
   61 SLSYEKQEPK FFVSVLTDID ANKHYCACLS FHETVA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.619789
Match: PF03456.9
Description: No description for PF03456.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITQTRSVDDE DETIGSSRLL GATPSSMDGI TTTSTPASIT HHSVMYAPKC LVLISRLDCA  60
   61 ETFKNCLGTI YTVYIENLAY GLETLIGNIL GCIQVPPAGG PQVRFSIGAG DKQSLQPPQS 120
  121 SSLPTTGSGV HFLFKQLGIK NVLILLCSVM TENKILFLSK CYWHLTDSCR ALVALMYPFR 180
  181 YTHVYIPILP APLTEVLSTP TPFIMGIHSS LQTEITDLLD VIVVDLDGGL VTIPES

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 62.136677
Match: PF02141.12
Description: No description for PF02141.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [333-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTPPVPILPS PLWEQTQDLL SMILFPNLAQ ADLAFPTLER PSAIAKTDAQ IDKELRAIFM  60
   61 RLFAQLLQGY RSCLTIIRIH PKPVITFHKA GFLGARDLIE SEFLFRVLDS MFFTTFVNER 120
  121 GPPWRS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 28.920819
Match: PF03455.10
Description: No description for PF03455.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [459-656]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDAWDELYSS MNELLKSEAQ NRNLVGRTQR FKGYFNFTFP SYFQILTHIQ ELGRVLYENE  60
   61 GTLAHISYAQ KVLRPPEGAF QRIHQPAFPR ISSEKVELII QEGIRKNGVP QRFHVTRNQH 120
  121 RIIPMGPRLP EALDVRPNVQ NSARRLEVLR ICVSYIFENR ITDARKLLPA VMRTLMHRDA 180
  181 RLILCREFFG YVHGNKAV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [657-840]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDHQQFELVV RFMNKALQKS SGIDEYTVAA ALLPMSTIFC RKLSTGVVQF AYTEIQDHAI  60
   61 WKNLQFWEST FFQDVQGQIK ALYLLHRRQN EHQKEANCVL DEVPLEEPTA LEITAEQLRK 120
  121 SPNIEEEKKA ELAKSEESTL YSQAIHFANR MVSLLIPLDV NVDAASKPKP AFRLEENQSV 180
  181 SNSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [841-925]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSHSLSEHS DEGFEENNAL EIGVTVGKTI SRFIDCVCTE GGVTSEHIRN LHDMVPGVVH  60
   61 MHIESLEPVY LEAKRHPHVQ KPKIQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [926-1022]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPCLLPGEDL VTDHLRCFLM PDGREDETQC LIPAEGALFL TNYRVIFKGS PCDPLFCEQV  60
   61 IVRTFPIASL LKEKKISVLY LAHLDQTLTE GLQLRSS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.086186
Match: PF02893.11
Description: No description for PF02893.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1023-1660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFQLIKVAFD PEVTPEQIES FRKILSKARH PFDEFEYFAF QSYGTMLQGV APLKTKEKYS  60
   61 TLKGFAKKTL LRGAKKAGFK QKQQTKRKLV SDYDYGSADA QETQSIDDEL EDGDEFETQN 120
  121 NAMPRLLTTK DVERMRERSY VQDWKRLGFD AESQRGFRIS NANTSYATCR SYPAIIVAPV 180
  181 QCSDAAIMHL GRCFKGQRIP LPTWRHANGA LLIRGGQPNS KSVIGMLKNT TGSTTNAHHD 240
  241 VTHYPEQDKY FLALINTMPK LTPLALNQYS GMNLSMSSLM GHSSSDDRQP LTPELSRKHK 300
  301 NNLDISDGNK SSQGGKGGTM KGNPKNSLAH PFRKMRLYAL GEKSQAKSNM NVDFCADFIP 360
  361 VDYPDIRQSR PAFKKLIRAC MPSHNTNEAD GQSFAKMVEQ SDWLQQISSL MQLSGAVVDL 420
  421 IDLQESSVML SLEDGSDVTA QLSSIAQLCL DPYYRSLDGF RVLVEKEWLA FGHRFAHRSN 480
  481 LKPSHANTNI AFAPTFLQFL DVVHQLQRQF PMAFEFNDFY LRFLAYHSVS CRFRTFLFDC 540
  541 ELERSDSGIA AMEDKRGSLN AKHMFGAGGM ATNGSDDECS VYPLDIRSQR APAPLNRIGH 600
  601 SIFDYIERQH NKTPIFYNFL YSGDKSVTLR PQNNVAAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 144.0
Match: 1lw3A
Description: Crystal Structure of Myotubularin-related protein 2 complexed with phosphate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.30669036331612 bayes_pls_golite062009
phosphatase activity 6.53298300144214 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.34103372884365 bayes_pls_golite062009
protein tyrosine phosphatase activity 5.71552511193227 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.10169989192986 bayes_pls_golite062009
hydrolase activity 4.27459885320933 bayes_pls_golite062009
transmembrane receptor protein phosphatase activity 4.08406741536367 bayes_pls_golite062009
transmembrane receptor protein tyrosine phosphatase activity 4.08406741536367 bayes_pls_golite062009
protein tyrosine/serine/threonine phosphatase activity 2.7244435750389 bayes_pls_golite062009
transmembrane receptor activity 2.46145625794727 bayes_pls_golite062009
receptor activity 2.27569467096563 bayes_pls_golite062009
molecular transducer activity 2.09373043968997 bayes_pls_golite062009
signal transducer activity 2.09373043968997 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.8743338569912 bayes_pls_golite062009
binding 1.42026750513729 bayes_pls_golite062009
protein binding 1.07441758584517 bayes_pls_golite062009
catalytic activity 1.06283028154109 bayes_pls_golite062009
inositol or phosphatidylinositol phosphatase activity 0.797185121839876 bayes_pls_golite062009
lipid phosphatase activity 0.734449638967758 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.60269333716049 bayes_pls_golite062009
non-membrane spanning protein tyrosine phosphatase activity 0.594382447716896 bayes_pls_golite062009
ion transmembrane transporter activity 0.440408293428823 bayes_pls_golite062009
cation transmembrane transporter activity 0.368252171155074 bayes_pls_golite062009
potassium channel activity 0.33927808168843 bayes_pls_golite062009
channel activity 0.29024318255551 bayes_pls_golite062009
passive transmembrane transporter activity 0.29024318255551 bayes_pls_golite062009
substrate-specific channel activity 0.274625894373147 bayes_pls_golite062009
gated channel activity 0.217548650508289 bayes_pls_golite062009
ion channel activity 0.207688369683596 bayes_pls_golite062009
cation channel activity 0.125967756551725 bayes_pls_golite062009

Predicted Domain #9
Region A:
Residues: [1661-1868]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLWCYYTNEE LAQGAPYDLE VTTVDDEIDL SETKGKRMVI TAGYDNMEKC NPSAYVCLLS  60
   61 EVKQAETERG HLPQKWLQVW NSLEVPQLEP VARNTSLGNI FVQTHQHKRS TLEIIMKGRL 120
  121 AGYQDKYFHP HRFEKHPYTT PTNCNHCTKL LWGPVGYRCM DCGNSYHEKC TEHSMKNCTK 180
  181 YKAIDGAVGP PNVNMSQGDT ASIASSAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.221849
Match: 1xa6A
Description: Crystal Structure of the Human Beta2-Chimaerin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.15139804299723 bayes_pls_golite062009
signal transducer activity 1.5242100351394 bayes_pls_golite062009
molecular transducer activity 1.5242100351394 bayes_pls_golite062009
protein binding 1.29100556128076 bayes_pls_golite062009
GTPase regulator activity 0.507221182248837 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.482573970055889 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.473228380405599 bayes_pls_golite062009
kinase activity 0.401449013594256 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.27531119327217 bayes_pls_golite062009
protein kinase activity 0.266851843850147 bayes_pls_golite062009
catalytic activity 0.194464246602439 bayes_pls_golite062009
lipid binding 0.12073899779791 bayes_pls_golite062009
protein serine/threonine kinase activity 0.0539426578243308 bayes_pls_golite062009

Predicted Domain #10
Region A:
Residues: [1869-1993]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTARTSSHHF YNQFSSNVAE NRTHEGHLYK RGALLKGWKQ RWFVLDSIKH QLRYYDTSED  60
   61 TAPKGIIELA EVQSVTAAQP AQIGAKGVDE KGFFDLKTSK RIYNFYAINA NLAQEWIEKL 120
  121 QACLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1v5uA
Description: Solution Structure of the C-terminal Pleckstrin Homology Domain of Sbf1 from Mouse
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.65091781683225 bayes_pls_golite062009
phosphoprotein phosphatase activity 2.51186557035049 bayes_pls_golite062009
protein binding 2.12168271674167 bayes_pls_golite062009
phosphoric ester hydrolase activity 1.9018280968413 bayes_pls_golite062009
phosphatase activity 1.90034030060323 bayes_pls_golite062009
molecular transducer activity 1.82233415659529 bayes_pls_golite062009
signal transducer activity 1.82233415659529 bayes_pls_golite062009
hydrolase activity 1.72604953071036 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.23074471235333 bayes_pls_golite062009
receptor activity 0.819319903902943 bayes_pls_golite062009
transmembrane receptor activity 0.696394500650961 bayes_pls_golite062009
protein domain specific binding 0.51731521446502 bayes_pls_golite062009
protein tyrosine phosphatase activity 0.47102669930753 bayes_pls_golite062009
lipid binding 0.12933186945671 bayes_pls_golite062009
receptor signaling protein activity 0.0787973205518102 bayes_pls_golite062009
receptor binding 0.0638301437766597 bayes_pls_golite062009
phospholipid binding 0.0143594745448499 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle