| Protein: | MTA1-like-PA |
| Organism: | Drosophila melanogaster |
| Length: | 880 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTA1-like-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
603.0 | [0..1] | [874..1] |
|
Region A: Residues: [1-270] |
1 11 21 31 41 51
| | | | | |
1 MATNMYRVGD YVYVETTPNS PYLIRRIEEL NKNQTGNVEA KVMCFYRRRD LPNPLVQLAD 60
61 KHQLATAEDS PLATKLKKTW LRTPVSEEQA AQAVLDPSIA ALDEERTSPT QTSGGGGSAT 120
121 GNSGSNSSGT SNNNSSSTAI GGGAGGSGGA GGDAEKGEAL TSKQRYQIKH RELFLSRQVE 180
181 SIPATQIRGK CSVTLLNETE SLQSYLNKDD TFFYCLVFDP NQKTLLADKG EIRVGSRYQC 240
241 DIPAKLKDTA TDDRKLEELE SLVWTPEHSL
|
| Detection Method: |  |
| Confidence: | 2.0 |
| Match: | 1w4sA |
| Description: | Crystal structure of the proximal BAH domain of polybromo |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [271-352] |
1 11 21 31 41 51
| | | | | |
1 TDRKIDQFLV VSRSIGTFAR ALDCSSSVKQ PSLHMSAAAA SRDITLFHAM NILHKHEYSI 60
61 EESMSSLVPS TGPVLCRDEI ED
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [353-418] |
1 11 21 31 41 51
| | | | | |
1 WSASEANLFE EALEKYGKDF NDIRQDFLPW KTLKQIIEYY YMWKTTDRYV QQKRVKAVEA 60
61 ELKLKQ
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 2crgA |
| Description: | Solution structure of the myb-like DNA-binding domain of mouse MTA3 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.87991790206998 | bayes_pls_golite062009 |
| transcription regulator activity | 2.122580758085 | bayes_pls_golite062009 |
| DNA binding | 1.98453325263719 | bayes_pls_golite062009 |
| nucleic acid binding | 1.93681952439958 | bayes_pls_golite062009 |
| transcription factor activity | 1.36872096268289 | bayes_pls_golite062009 |
| protein deacetylase activity | 1.30097338817679 | bayes_pls_golite062009 |
| histone deacetylase activity | 1.21500914041004 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.09150919349912 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.03881604759993 | bayes_pls_golite062009 |
| protein binding | 1.03780839342631 | bayes_pls_golite062009 |
| deacetylase activity | 0.690301184840273 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.187173982490585 | bayes_pls_golite062009 |
| transcription activator activity | 0.174325083775401 | bayes_pls_golite062009 |
| transcription factor binding | 0.14097776282047 | bayes_pls_golite062009 |
| chromatin binding | 0.123933030155299 | bayes_pls_golite062009 |
|
Region A: Residues: [419-652] |
1 11 21 31 41 51
| | | | | |
1 VYIPQYNNNG KGNGTSTKAG GGIYNGTTNG STDLSSNGKP CESCGTTKSS QWNSVSSGHS 60
61 TSRLCLSCWE YWRRYGSMKS ATKGDAGEGD AKKKSSSAAS TPTATLAGLA TTPTAVVDLN 120
121 DDEKISDLTN RQLHRCSIVN CGKEFKLKTH LARHYAQAHG IAISSGSPRP IMKTRTAFYL 180
181 HTNPMTRVAR AICRSIVKPK KAARQSAYAI NAMLVKQEFT NRISGKSQAE IKKL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [653-880] |
1 11 21 31 41 51
| | | | | |
1 LLLKPKDRGS VTKIANRLGA PGSGPHEWLV LTPKDKMPLP AVVSFPKPPK APDGSLVYDR 60
61 VPNKSPDVVA VPADKELTII PTQATSTIRK RAHEDQQLNG TEVTIVPSGP PAKRPNKDPM 120
121 PSHCPSPEQF AAMMAASGQP LSRHHLNGKQ KIAQMARGGN GRKQVISWMD APDDVYFRAN 180
181 DTHKKTRKIL SAVDLRRAAR KPWRTLPIKP AAPEPSSRPI ESQIVILD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
