| Protein: | FBpp0300559, syn... |
| Organism: | Drosophila melanogaster |
| Length: | 1218 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0300559, syn....
| Description | E-value | Query Range |
Subject Range |
|
|
1070.0 | [0..1] | [1217..1] |
|
Region A: Residues: [1-180] |
1 11 21 31 41 51
| | | | | |
1 MAMSKVIRVL EKSIAPSPHS VLLEHRNKSD SILFESHAVA LLTQQETDVI RKQYTKVCDA 60
61 YGCLGALQLN AGESTVLFLV LVTGCVSMGK IGDIEIFRIT QTTFVSLQNA APNEDKISEV 120
121 RKLLNSGTFY FAHTNASASA SGASSYRFDI TLCAQRRQQT QETDNRFFWN RMMHIHLMRF 180
181
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [181-339] |
1 11 21 31 41 51
| | | | | |
1 GIDCQSWLLQ AMCGSVEVRT VYIGAKQARA AIISRLSCER AGTRFNVRGT NDEGYVANFV 60
61 ETEQVIYVDG DVTSYVQTRG SVPLFWEQPG VQVGSHKVKL SRGFETSAAA FDRHMSMMRQ 120
121 RYGYQTVVNL LGSSLVGSKE GEAMLSNEFQ RHHGMSAHK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [340-497] |
1 11 21 31 41 51
| | | | | |
1 DVPHVVFDYH QECRGGNFSA LAKLKERIVA CGANYGVFHA SNGQVLREQF GVVRTNCLDC 60
61 LDRTNCVQTY LGLDTLGIQL EALKMGGKQQ NISRFEEIFR QMWINNGNEV SKIYAGTGAI 120
121 QGGSKLMDGA RSAARTIQNN LLDNSKQEAI DVLLVGST
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [498-886] |
1 11 21 31 41 51
| | | | | |
1 LSSELADRAR ILLPSNMLHA PTTVLRELCK RYTEYVRPRM ARVAVGTYNV NGGKHFRSIV 60
61 FKDSLADWLL DCHALARSKA LVDVNNPSEN VDHPVDIYAI GFEEIVDLNA SNIMAASTDN 120
121 AKLWAEELQK TISRDNDYVL LTYQQLVGVC LYIYIRPEHA PHIRDVAIDC VKTGLGGATG 180
181 NKGACAIRFV LHGTSMCFVC AHFAAGQSQV AERNADYAEI TRKLAFPMGR TLKSHDWVFW 240
241 CGDFNYRIDM EKDELKECVR NGDLSTVLEF DQLRKEQEAG NVFGEFLEGE ITFDPTYKYD 300
301 LFSDDYDTSE KQRAPAWTDR VLWRRRKALA EGDFAASAWN PGKLIHYGRS ELKQSDHRPV 360
361 IAIIDAEIME IDQQRRRAVF EQVIRDLGP
|
| Detection Method: | |
| Confidence: | 87.045757 |
| Match: | 1i9yA |
| Description: | Synaptojanin, IPP5C domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, acting on ester bonds | 5.89224335840239 | bayes_pls_golite062009 |
| phosphatidylinositol bisphosphate phosphatase activity | 5.76202422677892 | bayes_pls_golite062009 |
| phosphoinositide 5-phosphatase activity | 5.57319461575586 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 5.57319461575586 | bayes_pls_golite062009 |
| phosphatase activity | 5.52443562029354 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 5.46652892688189 | bayes_pls_golite062009 |
| inositol trisphosphate phosphatase activity | 4.92394158055025 | bayes_pls_golite062009 |
| inositol-polyphosphate 5-phosphatase activity | 4.20215185632047 | bayes_pls_golite062009 |
| inositol or phosphatidylinositol phosphatase activity | 3.88924621938812 | bayes_pls_golite062009 |
| lipid phosphatase activity | 3.07322777760243 | bayes_pls_golite062009 |
| phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity | 2.64934277728302 | bayes_pls_golite062009 |
| phosphatidylinositol-4-phosphate phosphatase activity | 2.64934277728302 | bayes_pls_golite062009 |
| hydrolase activity | 2.1345957248514 | bayes_pls_golite062009 |
| phosphatidylinositol-3-phosphatase activity | 1.98439062808392 | bayes_pls_golite062009 |
| catalytic activity | 1.76511376991978 | bayes_pls_golite062009 |
| protein binding | 1.5271034827438 | bayes_pls_golite062009 |
| DNA binding | 1.45924870577723 | bayes_pls_golite062009 |
| nucleic acid binding | 1.38966944580562 | bayes_pls_golite062009 |
| transcription regulator activity | 1.37597495586534 | bayes_pls_golite062009 |
| binding | 1.31660174492743 | bayes_pls_golite062009 |
| nuclease activity | 0.782488606133604 | bayes_pls_golite062009 |
| phosphatidylinositol trisphosphate phosphatase activity | 0.731013770154616 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.620825895803427 | bayes_pls_golite062009 |
| phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 0.558149994726796 | bayes_pls_golite062009 |
| transcription activator activity | 0.239217168608234 | bayes_pls_golite062009 |
| exonuclease activity | 0.219613338022829 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.213742479001316 | bayes_pls_golite062009 |
| transcription factor binding | 0.19603200433138 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 0.137101173922861 | bayes_pls_golite062009 |
|
Region A: Residues: [887-950] |
1 11 21 31 41 51
| | | | | |
1 PDSTIVVHVL ESSATGDEDG PTIYDENVMS ALITELSKMG EVTLVRYVED TMWVTFRDGE 60
61 SALN
|
| Detection Method: | |
| Confidence: | 2.86 |
| Match: | 1ufwA |
| Description: | Solution structure of RNP domain in Synaptojanin 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 3.6649737847299 | bayes_pls_golite062009 |
| binding | 3.05100551329453 | bayes_pls_golite062009 |
| protein phosphatase 2B binding | 2.57573204792118 | bayes_pls_golite062009 |
| mRNA binding | 2.34625118663896 | bayes_pls_golite062009 |
| protein binding | 2.10850948869511 | bayes_pls_golite062009 |
| RNA binding | 2.00450757962078 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.80774225072473 | bayes_pls_golite062009 |
| transcription regulator activity | 1.20182415212933 | bayes_pls_golite062009 |
| transporter activity | 1.17508255371693 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.076425286008 | bayes_pls_golite062009 |
| DNA binding | 1.06738888024145 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.805461754846875 | bayes_pls_golite062009 |
| structural molecule activity | 0.767649718525223 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.54965830425226 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.298769812594949 | bayes_pls_golite062009 |
| transcription factor activity | 0.273768131383019 | bayes_pls_golite062009 |
| translation regulator activity | 0.246220338604608 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.23733335659183 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0463102914393024 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.0127733116412899 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0110854752198585 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.00299446537936399 | bayes_pls_golite062009 |
|
Region A: Residues: [951-1218] |
1 11 21 31 41 51
| | | | | |
1 ASSKKSIQVC GLDLILELKS KDWQHLVDSE IELCTTNTIP LCANPVEHAQ LLQAITPELP 60
61 QRPKQPPTRP PARPPMPMSP KNSPRHLPHV GVISIVPKPA KPPMPPQPQS QPLIPSPLQP 120
121 QVAPPRPPAM DTTPSSKSQS PTELVSASSS TSSSGKTSPT APAVLSGPPT PPRQMQSKQA 180
181 TPVSTPTRQV GSPKDPIPSD TAYETASNIY EEIQEDVPAP RHPPPAGPPP VIGAPMGPPP 240
241 PLPNRRGPPP IPNRSGNAPP LPTRPANN
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
