| Protein: | Prp19-PA |
| Organism: | Drosophila melanogaster |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Prp19-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
499.0 | [0..26] | [504..1159] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MALVCALTNE VPETPVVSPH SGAVFEKRVI EKYLLENGCD PISGKELKPE ELIEIKTPAV 60
61 VKPKP
|
| Detection Method: |  |
| Confidence: | 17.39794 |
| Match: | 1n87A |
| Description: | Pre-mRNA splicing factor Prp19 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 10.2497392096259 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 10.0460587929138 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.99384576623969 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 7.6988425139962 | bayes_pls_golite062009 |
| 4.77196423114965 | bayes_pls_golite062009 | |
| ligase activity | 3.92677358871643 | bayes_pls_golite062009 |
| RNA binding | 3.04658201081989 | bayes_pls_golite062009 |
| binding | 2.78710909602478 | bayes_pls_golite062009 |
| transcription regulator activity | 2.72498741013971 | bayes_pls_golite062009 |
| protein binding | 2.64803540957326 | bayes_pls_golite062009 |
| SUMO polymer binding | 2.43472107361379 | bayes_pls_golite062009 |
| nucleic acid binding | 2.32387297115017 | bayes_pls_golite062009 |
| DNA binding | 2.00904221080834 | bayes_pls_golite062009 |
| transcription repressor activity | 1.98209395225978 | bayes_pls_golite062009 |
| ubiquitin-ubiquitin ligase activity | 1.37401357060257 | bayes_pls_golite062009 |
| transcription factor activity | 1.22579085356684 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.2126425713931 | bayes_pls_golite062009 |
| transcription factor binding | 1.11842175076436 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 1.03469202541773 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.03166235240211 | bayes_pls_golite062009 |
| copper ion binding | 0.649716953783871 | bayes_pls_golite062009 |
| hydrolase activity | 0.52386813728704 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.50197530717959 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.384990496120483 | bayes_pls_golite062009 |
| metal ion binding | 0.27118370366296 | bayes_pls_golite062009 |
| cation binding | 0.27118370366296 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 0.265769062717221 | bayes_pls_golite062009 |
| ion binding | 0.265633945008889 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.233838999434784 | bayes_pls_golite062009 |
| transition metal ion binding | 0.219773564054437 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
| transcription activator activity | 0.126093965701234 | bayes_pls_golite062009 |
| enzyme binding | 0.104373352314595 | bayes_pls_golite062009 |
|
Region A: Residues: [66-166] |
1 11 21 31 41 51
| | | | | |
1 PSATSIPATL KTMQDEWDAL MIHSFTQRQQ LQTTRQELSH ALYQHDAACR VIARLNKEVA 60
61 AAREALATLK PQAGIANAPT AIPQPALASE AGGAAAHPME Q
|
| Detection Method: | |
| Confidence: | 38.619789 |
| Match: | PF08606.2 |
| Description: | No description for PF08606.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [167-505] |
1 11 21 31 41 51
| | | | | |
1 AGMSAEVIQK LQDKATVLTQ ERKKRGRTVP EDLVTTDQVK NFLTVASHPG LHSASVPGIL 60
61 ALDINSADHS KILTGGNDKN ATVFNKDTEQ MVAILKGHTK KITKVIYHPN EDTVITGSPD 120
121 MNIRIWHVPT SQTQLLLRCH EGPVTGLSLH PTGDYLLSTS SDKHWAFSDI RTGRLLTKVI 180
181 DTAEVGLTTA QFHPDGLIFG TGTVDSQVKI WDLKEQSNVA NFPGHTGPIS AISFSENGYY 240
241 LATAADDACV KLWDLRKLKN FKTIQLDDGY EVKDLCFDQS GTYLAIAGSD VRVYLCKQWQ 300
301 ELKVFNDHTA LATGVRFGKH AQYLASTSMD RTLKLYAIE
|
| Detection Method: | |
| Confidence: | 82.154902 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
