| Protein: | Lis-1-PB, Lis-1-... |
| Organism: | Drosophila melanogaster |
| Length: | 411 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lis-1-PB, Lis-1-....
| Description | E-value | Query Range |
Subject Range |
|
|
502.0 | [0..2] | [410..1233] |
|
Region A: Residues: [1-411] |
1 11 21 31 41 51
| | | | | |
1 MKMVLSQRQR EELNQAIADY LGSNGYADSL ETFRKEADLS TEVEKKFGGL LEKKWTSVIR 60
61 LQKKVMELEA KLTEAEKEVI EGAPTKNKRT PGEWIPRPPE KFSLTGHRAS ITRVIFHPIF 120
121 ALMVSASEDA TIRIWDFETG EYERSLKGHT DSVQDVAFDA QGKLLASCSA DLSIKLWDFQ 180
181 QSYECIKTMH GHDHNVSSVA FVPAGDYVLS ASRDRTIKMW EVATGYCVKT YTGHREWVRM 240
241 VRVHIEGSIF ATCSNDQTIR VWLTNSKDCK VELRDHEHTV ECIAWAPEAA ASAINEAAGA 300
301 DNKKGHHQGP FLASGSRDKT IRIWDVSVGL CLLTLSGHDN WVRGLAFHPG GKYLVSASDD 360
361 KTIRVWDLRN KRCMKTLYAH QHFCTSIDFH KAHPYVISGS VDQTVKVWEC R
|
| Detection Method: |  |
| Confidence: | 93.69897 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| dynactin binding | 7.11157019623125 | bayes_pls_golite062009 |
| 6.67009948605948 | bayes_pls_golite062009 | |
| dynein heavy chain binding | 6.59987903164261 | bayes_pls_golite062009 |
| snoRNA binding | 5.21229097335349 | bayes_pls_golite062009 |
| structural molecule activity | 5.05435272846365 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| GTPase activity | 4.02994814377904 | bayes_pls_golite062009 |
| actin binding | 3.86142918698875 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.85374902981345 | bayes_pls_golite062009 |
| RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 3.31760161664239 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.25521258308263 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 2.43196533618619 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| unfolded protein binding | 2.07597866771866 | bayes_pls_golite062009 |
| actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
| transcription repressor activity | 2.03485691549401 | bayes_pls_golite062009 |
| transcription regulator activity | 1.95667720244696 | bayes_pls_golite062009 |
| nucleic acid binding | 1.90457914882449 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 1.63631972867316 | bayes_pls_golite062009 |
| acyltransferase activity | 1.6301799051509 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 1.59523251984393 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 1.46155402212921 | bayes_pls_golite062009 |
| DNA binding | 1.38475369554616 | bayes_pls_golite062009 |
| platelet-activating factor acetyltransferase activity | 1.36229564654648 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| peroxisome matrix targeting signal-2 binding | 1.26984584070766 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.2107661925348 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
| myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| type 1 angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 0.848140419140051 | bayes_pls_golite062009 |
| kinase activity | 0.807669232329985 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.805273887494167 | bayes_pls_golite062009 |
| transcription factor activity | 0.804334981068351 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 0.707581908546932 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| transcription initiation factor activity | 0.656824577987243 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.634547834947756 | bayes_pls_golite062009 |
| protein kinase activity | 0.544118712921054 | bayes_pls_golite062009 |
| insulin receptor binding | 0.43316396073854 | bayes_pls_golite062009 |
| transcription factor binding | 0.412844855996155 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.28606552120995 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.19391619547146 | bayes_pls_golite062009 |
| chromatin binding | 0.190739938818992 | bayes_pls_golite062009 |
| telomerase activity | 0.18450996813475 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.161639372576406 | bayes_pls_golite062009 |
| myosin II binding | 0.12060669039328 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.0803897416817422 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| kinase binding | 0.0366162235750993 | bayes_pls_golite062009 |
| protein kinase binding | 0.00858004043229577 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
