| Protein: | Cul-4-PB, Cul-4-PA |
| Organism: | Drosophila melanogaster |
| Length: | 821 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cul-4-PB, Cul-4-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
842.0 | [0..1] | [821..1] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MSAAKKYKPM DTTELHENTE NIAACLKKAE NVAPTAAAAS SVGRSAFAAQ NMNSASTNGE 60
61 RLPNFSKLGG SHGEIRTAST TSNLLNRMGA IHNSKPGDVK KIVIKNFKDK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [111-821] |
1 11 21 31 41 51
| | | | | |
1 PTLPDNYSKD TYVKLEEAVI AIQLSKPIKY SLEELYQAVV NMCSHKMDAQ LYAKLKELTE 60
61 QHVKRNIKLK ELTGGSMDKL ILLEKINHWW LSFCQQMIMI RSIFLYMDRT YVLQNSTVHS 120
121 IWDMGLDLFR IHFAQNSVVQ KRTVDGLLTL IEKERQGSTV DRGLLKSLVR MLCDLQIYTS 180
181 SFEEKFLDAT NQLYKAESQR KMQELEVPEY LQHVNKRLAE ENERLRHYLD SSTKHPLIYN 240
241 VEKELLAEHL TSILQKGLDS LLEDNRLSDL TLLYGLLSRV KNGTSELCGN FNGFIKKKGR 300
301 TIVIDPEKDK SMVQDLLDFK DKMDVIVRTC FEHNEKFTNS LREAFEFFIN QRANKPAELI 360
361 AKYVDMKLRS GNKGTTDEEL EKTLDKIMVL FRFIHGKDVF EAFYKKDLAK RLLVGKSASV 420
421 DSEKSMLSKL KQECGGGFTS KLEGMFKDME LSRDINIAFR GHALSNNRDV HNLDLCVSIL 480
481 TMGYWPTYAP TEVTMPPQFI NPQQIFNKFY LEKHSGRKLQ WQPTLGNCML RAQFDAGPKE 540
541 LLVSLFQALV LLLFNDKPVL SYEEILAATL IEDGELRRTL QSLACGRARV ITKTPKGREI 600
601 LDGDQFDFNN EFTNKLFRIK INQIQMKETN EEQKATEERV FQDRQYQIDA AIVRIMKMRK 660
661 TLSHNLLITE LFNQLTFPVK PADLKKRIES LIDRDYMERD KDNQNQYNYV A
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 2hyeC |
| Description: | No description for 2hyeC was found. |
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 9.47178230940453 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 9.15192834197166 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.12051073361876 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 6.87003086224111 | bayes_pls_golite062009 |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| transcription repressor activity | 3.85678231380989 | bayes_pls_golite062009 |
| ligase activity | 3.66453881539688 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| binding | 2.3219000606044 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21939548334548 | bayes_pls_golite062009 |
| protein binding | 2.20237620151495 | bayes_pls_golite062009 |
| vasopressin activated calcium mobilizing receptor activity | 2.15618962838168 | bayes_pls_golite062009 |
| DNA binding | 2.06132216820898 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.33374581364046 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.96257232341735 | bayes_pls_golite062009 |
| transporter activity | 0.891050405674973 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| DNA replication origin binding | 0.71823621709622 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.697234220778482 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.648150681919233 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.368917395770011 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.322180400748724 | bayes_pls_golite062009 |
| DNA helicase activity | 0.300899564141452 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.286130392009263 | bayes_pls_golite062009 |
| structural molecule activity | 0.272316540117209 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.257777071965243 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| catalytic activity | 0.201606344181603 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.175575779922515 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.107671044044222 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0912115683429473 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
