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View Structure Prediction Details

Protein: Alg-2-PD
Organism: Drosophila melanogaster
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Alg-2-PD.

Description E-value Query
Range
Subject
Range
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
177.0 [0..4] [144..513]
gi|94471603 - gi|94471603|gb|ABF21069.1| mitochondrial calcium sensor cameleon 4mtD3cpv [synthetic construct]
168.0 [0..4] [152..364]
gi|114677917 - gi|114677917|ref|XP_512771.2| PREDICTED: similar to calmodulin [Pan troglodytes]
161.0 [0..1] [144..122]
gi|76628526 - gi|76628526|ref|XP_874377.1| PREDICTED: similar to calmodulin 1 [Bos taurus]
160.0 [0..4] [144..78]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYNHDGMPD QQFLWDVFQR VDKDRSGHIS ADELQVALSN GTWSAFNPET IRLMIGMFDR  60
   61 ENKGTVSFKD FGALWKYVTD WQNCFRSFDR DNSGNIDKTE LKTALTSFGY RLSDHLIDVL 120
  121 LRKFDRFGRG TILFDDFIQC CIVLYVSMTV IAIYEYKVAV GSRDFRCLAY EKIFEIALKP 180
  181 ARKNCMAFRV FSNVFANKRS PLINMSERYS RVLYYQLLR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.39794
Match: 1hqvA
Description: Apoptosis-linked protein alg-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
N-terminal myristoylation domain binding 5.00447869061432 bayes_pls_golite062009
calcium ion binding 3.79609619542776 bayes_pls_golite062009
cytoskeletal protein binding 3.49668552859347 bayes_pls_golite062009
myosin heavy chain binding 3.47664712991566 bayes_pls_golite062009
motor activity 3.25814691068414 bayes_pls_golite062009
binding 3.17556402087346 bayes_pls_golite062009
metal ion binding 2.62077305565026 bayes_pls_golite062009
cation binding 2.62077305565026 bayes_pls_golite062009
ion binding 2.61312132078717 bayes_pls_golite062009
tubulin binding 2.51210014078446 bayes_pls_golite062009
actin binding 2.38676888633305 bayes_pls_golite062009
ion transmembrane transporter activity 2.29802198409541 bayes_pls_golite062009
cation transmembrane transporter activity 2.28098452079347 bayes_pls_golite062009
protein binding 2.21291432166051 bayes_pls_golite062009
microtubule binding 2.17136406283012 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.12961051741613 bayes_pls_golite062009
myosin II heavy chain binding 1.88775123370459 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.74951443813569 bayes_pls_golite062009
structural constituent of muscle 1.59541980494825 bayes_pls_golite062009
transcription regulator activity 1.29595371278065 bayes_pls_golite062009
transporter activity 1.15928534291452 bayes_pls_golite062009
signal transducer activity 1.11607939838219 bayes_pls_golite062009
molecular transducer activity 1.11607939838219 bayes_pls_golite062009
microfilament motor activity 1.0725773039399 bayes_pls_golite062009
nucleic acid binding 1.02715871704923 bayes_pls_golite062009
DNA binding 0.98588735736701 bayes_pls_golite062009
transmembrane transporter activity 0.945691505472547 bayes_pls_golite062009
cation channel activity 0.856991182112951 bayes_pls_golite062009
actin-dependent ATPase activity 0.83859958498483 bayes_pls_golite062009
actin filament binding 0.836375875773328 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.787740261079819 bayes_pls_golite062009
kinase activity 0.782396352346639 bayes_pls_golite062009
G-protein beta/gamma-subunit binding 0.77824189826064 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.654002071540024 bayes_pls_golite062009
substrate-specific transporter activity 0.438908712437433 bayes_pls_golite062009
hydrolase activity 0.378268353045111 bayes_pls_golite062009
substrate-specific channel activity 0.366129174039334 bayes_pls_golite062009
0.34446792626966 bayes_pls_golite062009
voltage-gated cation channel activity 0.341357838238159 bayes_pls_golite062009
channel regulator activity 0.32809521759917 bayes_pls_golite062009
voltage-gated channel activity 0.308919475701377 bayes_pls_golite062009
transferase activity 0.304928629994907 bayes_pls_golite062009
voltage-gated ion channel activity 0.304496519713588 bayes_pls_golite062009
potassium channel activity 0.260530997378698 bayes_pls_golite062009
active transmembrane transporter activity 0.246383459363256 bayes_pls_golite062009
structural molecule activity 0.234626449126289 bayes_pls_golite062009
gated channel activity 0.175191914660841 bayes_pls_golite062009
voltage-gated potassium channel activity 0.157059988605635 bayes_pls_golite062009
myosin binding 0.125186564742711 bayes_pls_golite062009
structural constituent of cytoskeleton 0.116648335890738 bayes_pls_golite062009
troponin T binding 0.110771673973181 bayes_pls_golite062009
channel activity 0.0711800677928949 bayes_pls_golite062009
passive transmembrane transporter activity 0.0711800677928949 bayes_pls_golite062009
ion channel activity 0.0166394982861724 bayes_pls_golite062009

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