| Protein: | gi|123996147, gi... |
| Organism: | synthetic construct |
| Length: | 370 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123996147, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-56 | [1..370] | [1..370] |
|
|
1.0E-55 | [1..370] | [1..370] |
|
|
3.0E-55 | [1..370] | [1..370] |
|
|
3.0E-55 | [1..370] | [1..370] |
|
|
5.0E-55 | [1..370] | [1..370] |
|
|
7.0E-55 | [1..370] | [1..370] |
|
Region A: Residues: [1-370] |
1 11 21 31 41 51
| | | | | |
1 MSHPSPQAKP SNPSNPRVFF DVDIGGERVG RIVLELFADI VPKTAENFRA LCTGEKGIGH 60
61 TTGKPLHFKG CPFHRIIKKF MIQGGDFSNQ NGTGGESIYG EKFEDENFHY KHDREGLLSM 120
121 ANAGRNTNGS QFFITTVPTP HLDGKHVVFG QVIKGIGVAR ILENVEVKGE KPAKLCVIAE 180
181 CGELKEGDDG GIFPKDGSGD SHPDFPEDAD IDLKDVDKIL LITEDLKNIG NTFFKSQNWE 240
241 MAIKKYAEVL RYVDSSKAVI ETADRAKLQP IALSCVLNIG ACKLKMSNWQ GAIDSCLEAL 300
301 ELDPSNTKAL YRRAQGWQGL KEYDQALADL KKAQGIAPED KAIQAELLKV KQKIKAQKDK 360
361 EKAVYAKMFA
|
| Detection Method: |  |
| Confidence: | 56.69897 |
| Match: | 1ihgA |
| Description: | Cyclophilin 40; Cyclophilin 40 isomerase domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 4.3775483906311 | bayes_pls_golite062009 |
| histone deacetylase activity | 4.29026678196473 | bayes_pls_golite062009 |
| peptidyl-prolyl cis-trans isomerase activity | 3.73853378771688 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 3.66963215732405 | bayes_pls_golite062009 |
| deacetylase activity | 3.49940864924766 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.01511519120932 | bayes_pls_golite062009 |
| RNA binding | 2.94609837984526 | bayes_pls_golite062009 |
| signal sequence binding | 2.68460419248567 | bayes_pls_golite062009 |
| isomerase activity | 1.96529188741504 | bayes_pls_golite062009 |
| binding | 1.65866393331484 | bayes_pls_golite062009 |
| mRNA binding | 1.45537055700871 | bayes_pls_golite062009 |
| unfolded protein binding | 1.38124355054041 | bayes_pls_golite062009 |
| transcription regulator activity | 1.26149030245805 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 1.01220052237687 | bayes_pls_golite062009 |
| DNA binding | 0.9531600253493 | bayes_pls_golite062009 |
| nucleic acid binding | 0.939772862764466 | bayes_pls_golite062009 |
| catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
| hydrolase activity | 0.493806105600863 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.408539130322443 | bayes_pls_golite062009 |
| transcription factor activity | 0.374364600772076 | bayes_pls_golite062009 |
| drug binding | 0.36339132904137 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.322244688184474 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.286133802341887 | bayes_pls_golite062009 |
| histone binding | 0.268719695649015 | bayes_pls_golite062009 |
| protein binding | 0.230077752280113 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.105969834846946 | bayes_pls_golite062009 |
| receptor binding | 0.0640017685740477 | bayes_pls_golite062009 |
