| Protein: | Dscam-PAE |
| Organism: | Drosophila melanogaster |
| Length: | 2016 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PAE.
| Description | E-value | Query Range |
Subject Range |
|
|
1514.0 | [0..3] | [2016..3] |
|
Region A: Residues: [1-241] |
1 11 21 31 41 51
| | | | | |
1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60
61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
121 NQFGSIISRD VHVRAVVNQF YGADILMEYV IRGNAAVLKC SIPSFVADFV RVESWIDEEG 180
181 TELRPSENYD GKYLVLPSGE LHIREVGPED GYKSYQCRTK HRLTGETRLS ATKGRLVITE 240
241 P
|
| Detection Method: |  |
| Confidence: | 81.39794 |
| Match: | 2v5sA |
| Description: | No description for 2v5sA was found. |
|
Region A: Residues: [242-898] |
1 11 21 31 41 51
| | | | | |
1 ISSAVPKVVS LAKFDMKTYS GSSTMALLCP AQGYPVPVFR WYKFIEGTTR KQAVVLNDRV 60
61 KQVSGTLIIK DAVVEDSGKY LCVVNNSVGG ESVETVLTVT APLSAKIDPP TQTVDFGRPA 120
121 VFTCQYTGNP IKTVSWMKDG KAIGHSEPVL RIESVKKEDK GMYQCFVRND QESAEASAEL 180
181 KLGGRFDPPV IRQAFQEETM EPGPSVFLKC VAGGNPTPEI SWELDGKKIA NNDRYQVGQY 240
241 VTVNGDVVSY LNITSVHAND GGLYKCIAKS KVGVAEHSAK LNVYGLPYIR QMEKKAIVAG 300
301 ETLIVTCPVA GYPIDSIVWE RDNRALPINR KQKVFPNGTL IIENVERNSD QATYTCVAKN 360
361 QEGYSARGSL EVQVMVPPKI AHFDFGDHAV NFEESVSVNC LIYLGDLPMD ITWLFNGAHI 420
421 NAYTGVSIVK GGKKASILTI DSVHAGHAGN YTCKARNDAD SAEYSAELIV NVPPRWILEP 480
481 TDKAFAQGSD AKVECKADGF PKPQVTWKKA VGDTPGEYKD LKKSDNIRVE EGTLHVDNIQ 540
541 KTNEGYYLCE AINGIGSGLS AVIMISVQAP PEFTEKLRNQ TARRGEPAVL QCEAKGEKPI 600
601 GILWNMNNMR LDPKNDNRYT IREEILSTGV MSSLSIKRTE RSDSALFTCV ATNAFGS
|
| Detection Method: | |
| Confidence: | 60.0 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [899-997] |
1 11 21 31 41 51
| | | | | |
1 DDASINMIVQ EVPEMPYALK VLDKSGRSVQ LSWAQPYDGN SPLDRYIIEF KRSRASWSEI 60
61 DRVIVPGHTT EAQVQKLSPA TTYNIRIVAE NAIGTSQSS
|
| Detection Method: | |
| Confidence: | 33.522879 |
| Match: | 2nziA |
| Description: | No description for 2nziA was found. |
|
Region A: Residues: [998-1103] |
1 11 21 31 41 51
| | | | | |
1 EAVTIITAEE APSGKPQNIK VEPVNQTTMR VTWKPPPRTE WNGEILGYYV GYKLSNTNSS 60
61 YVFETINFIT EEGKEHNLEL QNLRVYTQYS VVIQAFNKIG AGPLSE
|
| Detection Method: | |
| Confidence: | 10.0 |
| Match: | 2edxA |
| Description: | No description for 2edxA was found. |
|
Region A: Residues: [1104-1213] |
1 11 21 31 41 51
| | | | | |
1 EEKQFTAEGT PSQPPSDTAC TTLTSQTIRV GWVSPPLESA NGVIKTYKVV YAPSDEWYDE 60
61 TKRHYKKTAS SDTVLHGLKK YTNYTMQVLA TTAGGDGVRS VPIHCQTEPD
|
| Detection Method: | |
| Confidence: | 19.522879 |
| Match: | 1qg3A |
| Description: | Integin beta-4 subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1214-1685] |
1 11 21 31 41 51
| | | | | |
1 VPEAPTDVKA LVMGNAAILV SWRPPAQPNG IITQYTVYSK AEGAETETKT QKVPHYQMSF 60
61 EATELEKNKP YEFWVTASTT IGEGQQSKSI VAMPSDQVPA KIASFDDTFT ATFKEDAKMP 120
121 CLAVGAPQPE ITWKIKGVEF SANDRMRVLP DGSLLIKSVN RQDAGDYSCH AENSIAKDSI 180
181 THKLIVLAPP QSPHVTLSAT TTDALTVKLK PHEGDTAPLH GYTLHYKPEF GEWETSEVSV 240
241 DSQKHNIEGL LCGSRYQVYA TGFNNIGAGE ASDILNTRTK GQKPKLPEKP RFIEVSSNSV 300
301 SLHFKAWKDG GCPMSHFVVE SKKRDQIEWN QISNNVKPDN NYVVLDLEPA TWYNLRITAH 360
361 NSAGFTVAEY DFATLTVTGG TIAPSRDLPE LSAEDTIRII LSNLNLVVPV VAALLVIIIA 420
421 IIVICILRSK GNHHKDDVVY NQTMGPGATL DKRRPDLRDE LGYIAPPNRK LP
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | 2v5yA |
| Description: | No description for 2v5yA was found. |
|
Region A: Residues: [1686-1794] |
1 11 21 31 41 51
| | | | | |
1 PVPGSNYNTC DRIKRGRGGL RSNHSTWDPR RNPNLYEELK APPVPMHGNH YGHAHGNAEC 60
61 HYRHPGMEDE ICPYATFHLL GFREEMDPTK AMNFQTFPHQ NGHAGPVPG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1795-1939] |
1 11 21 31 41 51
| | | | | |
1 HAGTMLPPGH PGHVHSRSGS QSMPRANRYQ RKNSQGGQSS IYTPAPEYDD PANCAEEDQY 60
61 RRYTRVNSQG GSLYSGPGPE YDDPANCAPE EDQYGSQYGG PYGQPYDHYG SRGSMGRRSI 120
121 GSARNPGNGS PEPPPPPPRN HDMSN
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1ueyA |
| Description: | Solution Structure of The First Fibronectin Type III Domain of Human KIAA0343 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| telethonin binding | 5.81747667416248 | bayes_pls_golite062009 |
| structural constituent of muscle | 5.71979489668015 | bayes_pls_golite062009 |
| transmembrane receptor activity | 4.81256300373074 | bayes_pls_golite062009 |
| ankyrin binding | 4.69755754047169 | bayes_pls_golite062009 |
| receptor activity | 4.66147271961356 | bayes_pls_golite062009 |
| alpha-actinin binding | 4.57951951779666 | bayes_pls_golite062009 |
| actinin binding | 4.57900103206288 | bayes_pls_golite062009 |
| cytokine binding | 4.43581512268554 | bayes_pls_golite062009 |
| cytokine receptor activity | 4.08668869714207 | bayes_pls_golite062009 |
| growth factor binding | 4.06808996928726 | bayes_pls_golite062009 |
| molecular transducer activity | 3.69234048247377 | bayes_pls_golite062009 |
| signal transducer activity | 3.69234048247377 | bayes_pls_golite062009 |
| protein binding | 3.24522318184038 | bayes_pls_golite062009 |
| binding | 3.12471204223368 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 2.32179186005318 | bayes_pls_golite062009 |
| peptide hormone binding | 2.12033076929638 | bayes_pls_golite062009 |
| axon guidance receptor activity | 2.01367445237355 | bayes_pls_golite062009 |
| prolactin receptor activity | 1.9556649101819 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.85720106085239 | bayes_pls_golite062009 |
| interleukin-2 binding | 1.67132604890013 | bayes_pls_golite062009 |
| myosin light chain kinase activity | 1.49217960276915 | bayes_pls_golite062009 |
| protein kinase activity | 1.42856560840953 | bayes_pls_golite062009 |
| nucleic acid binding | 1.32813363771214 | bayes_pls_golite062009 |
| receptor binding | 1.31676259534833 | bayes_pls_golite062009 |
| transcription regulator activity | 1.31663344632755 | bayes_pls_golite062009 |
| actin binding | 1.21472460452555 | bayes_pls_golite062009 |
| DNA binding | 1.2006039770643 | bayes_pls_golite062009 |
| growth hormone receptor activity | 1.15929762138929 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.15899955607967 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12142142875217 | bayes_pls_golite062009 |
| kinase activity | 1.11027658115625 | bayes_pls_golite062009 |
| ciliary neurotrophic factor receptor activity | 1.07748328484506 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 0.99058387466784 | bayes_pls_golite062009 |
| structural molecule activity | 0.94240190391222 | bayes_pls_golite062009 |
| peptide binding | 0.92031154055894 | bayes_pls_golite062009 |
| interleukin-6 receptor activity | 0.888638861691021 | bayes_pls_golite062009 |
| interleukin-6 binding | 0.888638861691021 | bayes_pls_golite062009 |
| protein dimerization activity | 0.86564366658585 | bayes_pls_golite062009 |
| cell surface binding | 0.792329562040096 | bayes_pls_golite062009 |
| heparin binding | 0.7054081997714 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.703490254739121 | bayes_pls_golite062009 |
| collagen binding | 0.688581536921572 | bayes_pls_golite062009 |
| kinase binding | 0.65927255037265 | bayes_pls_golite062009 |
| oncostatin-M receptor activity | 0.628488391922279 | bayes_pls_golite062009 |
| leukemia inhibitory factor receptor activity | 0.628488391922279 | bayes_pls_golite062009 |
| enzyme binding | 0.60195860585095 | bayes_pls_golite062009 |
| identical protein binding | 0.564711394496051 | bayes_pls_golite062009 |
| transcription factor activity | 0.557290274937694 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 0.554350228628563 | bayes_pls_golite062009 |
| hormone binding | 0.49524185948356 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.46168925186147 | bayes_pls_golite062009 |
| transferase activity | 0.432850266451294 | bayes_pls_golite062009 |
| polysaccharide binding | 0.4326581122899 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.40600177052491 | bayes_pls_golite062009 |
| protein kinase binding | 0.405060010394646 | bayes_pls_golite062009 |
| interleukin-7 binding | 0.301052531308189 | bayes_pls_golite062009 |
| pattern binding | 0.30071837231983 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.1430595594485 | bayes_pls_golite062009 |
| transcription activator activity | 0.135753557343301 | bayes_pls_golite062009 |
| actin filament binding | 0.135484838710405 | bayes_pls_golite062009 |
| protein homodimerization activity | 0.116391819218123 | bayes_pls_golite062009 |
| interleukin-2 receptor activity | 0.115337814289139 | bayes_pls_golite062009 |
| integrin binding | 0.0873424694168858 | bayes_pls_golite062009 |
| transcription factor binding | 0.075900818564989 | bayes_pls_golite062009 |
|
Region A: Residues: [1940-2016] |
1 11 21 31 41 51
| | | | | |
1 SSFNDSKESN EISEAECDRD HGPRGNYGAV KRSPQPKDQR TTEEMRKLIE RNETGPKQLQ 60
61 LQQANGAGFT AYDTMAV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
