| Protein: | Dscam-PM |
| Organism: | Drosophila melanogaster |
| Length: | 2017 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PM.
| Description | E-value | Query Range |
Subject Range |
|
|
1510.0 | [0..1] | [2017..1] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60
61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
121 NQFGSIISRD VHVRAVVS
|
| Detection Method: |  |
| Confidence: | 80.0 |
| Match: | 2v5sA |
| Description: | No description for 2v5sA was found. |
|
Region A: Residues: [139-604] |
1 11 21 31 41 51
| | | | | |
1 QHYEEDIHKA FVIRGNSAIL KCDIPSFVAD FVNVISWHSD EKENFYPGTE YDGKYLVLPS 60
61 GELHIREVGP EDGYKSYQCR TKHRLTGETR LSATKGRLVI TEPVGSVQPK ISVGERRKDA 120
121 EVPKHGDLSI FCPAQSYPVP AFRWYKFIEG TTRKQAVVLN DRVKQVSGTL IIKDAVVEDS 180
181 GKYLCVVNNS VGGESVETVL TVTAPLSAKI DPPTQTVDFG RPAVFTCQYT GNPIKTVSWM 240
241 KDGKAIGHSE PVLRIESVKK EDKGMYQCFV RNDQESAEAS AELKLGGRFD PPVIRQAFQE 300
301 ETMEPGPSVF LKCVAGGNPT PEISWELDGK KIANNDRYQV GQYVTVNGDV VSYLNITSVH 360
361 ANDGGLYKCI AKSKVGVAEH SAKLNVYGLP YIRQMEKKAI VAGETLIVTC PVAGYPIDSI 420
421 VWERDNRALP INRKQKVFPN GTLIIENVER NSDQATYTCV AKNQEG
|
| Detection Method: | |
| Confidence: | 53.045757 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [605-1307] |
1 11 21 31 41 51
| | | | | |
1 YSARGSLEVQ VMVPPQIQAF DFGSEAANTG EMAGGFCMVP KGDLPMEIRW TLNSAPIITG 60
61 EHGFSLSRLN PRTSSLSIDS LEARHRGLYR CIASNKAGSA EYSAELHVNV PPRWILEPTD 120
121 KAFAQGSDAK VECKADGFPK PQVTWKKAVG DTPGEYKDLK KSDNIRVEEG TLHVDNIQKT 180
181 NEGYYLCEAI NGIGSGLSAV IMISVQAPPE FTEKLRNQTA RRGEPAVLQC EAKGEKPIGI 240
241 LWNMNNMRLD PKNDNRYTIR EEILSTGVMS SLSIKRTERS DSALFTCVAT NAFGSDDASI 300
301 NMIVQEVPEM PYALKVLDKS GRSVQLSWAQ PYDGNSPLDR YIIEFKRSRA SWSEIDRVIV 360
361 PGHTTEAQVQ KLSPATTYNI RIVAENAIGT SQSSEAVTII TAEEAPSGKP QNIKVEPVNQ 420
421 TTMRVTWKPP PRTEWNGEIL GYYVGYKLSN TNSSYVFETI NFITEEGKEH NLELQNLRVY 480
481 TQYSVVIQAF NKIGAGPLSE EEKQFTAEGT PSQPPSDTAC TTLTSQTIRV GWVSPPLESA 540
541 NGVIKTYKVV YAPSDEWYDE TKRHYKKTAS SDTVLHGLKK YTNYTMQVLA TTAGGDGVRS 600
601 VPIHCQTEPD VPEAPTDVKA LVMGNAAILV SWRPPAQPNG IITQYTVYSK AEGAETETKT 660
661 QKVPHYQMSF EATELEKNKP YEFWVTASTT IGEGQQSKSI VAM
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 2dtgE |
| Description: | No description for 2dtgE was found. |
| Term | Confidence | Notes |
| growth factor binding | 6.33296746316446 | bayes_pls_golite062009 |
| telethonin binding | 5.81747667416248 | bayes_pls_golite062009 |
| structural constituent of muscle | 5.71979489668015 | bayes_pls_golite062009 |
| insulin-like growth factor binding | 5.09204037654114 | bayes_pls_golite062009 |
| ankyrin binding | 4.69755754047169 | bayes_pls_golite062009 |
| alpha-actinin binding | 4.57951951779666 | bayes_pls_golite062009 |
| actinin binding | 4.57900103206288 | bayes_pls_golite062009 |
| cytokine binding | 4.43581512268554 | bayes_pls_golite062009 |
| cytokine receptor activity | 4.08668869714207 | bayes_pls_golite062009 |
| insulin-like growth factor I binding | 3.14198260332974 | bayes_pls_golite062009 |
| binding | 3.10942625145915 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 3.09281229196379 | bayes_pls_golite062009 |
| protein binding | 3.04595153576805 | bayes_pls_golite062009 |
| insulin-like growth factor II binding | 2.35038076333169 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 2.32179186005318 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.11274485218746 | bayes_pls_golite062009 |
| receptor activity | 2.04770371945982 | bayes_pls_golite062009 |
| axon guidance receptor activity | 2.01367445237355 | bayes_pls_golite062009 |
| prolactin receptor activity | 1.9556649101819 | bayes_pls_golite062009 |
| molecular transducer activity | 1.716940423168 | bayes_pls_golite062009 |
| signal transducer activity | 1.716940423168 | bayes_pls_golite062009 |
| interleukin-2 binding | 1.67132604890013 | bayes_pls_golite062009 |
| protein kinase activity | 1.64316913174221 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.50579173120225 | bayes_pls_golite062009 |
| myosin light chain kinase activity | 1.49217960276915 | bayes_pls_golite062009 |
| collagen binding | 1.4103164804739 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.3823186140816 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.36671598599873 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.35826958219514 | bayes_pls_golite062009 |
| kinase activity | 1.33897988039058 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.32223335106618 | bayes_pls_golite062009 |
| transcription regulator activity | 1.31663344632755 | bayes_pls_golite062009 |
| phosphatase activator activity | 1.23699452328993 | bayes_pls_golite062009 |
| actin binding | 1.21726363067325 | bayes_pls_golite062009 |
| DNA binding | 1.2006039770643 | bayes_pls_golite062009 |
| nucleic acid binding | 1.17568458983071 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.17332908979699 | bayes_pls_golite062009 |
| growth hormone receptor activity | 1.15929762138929 | bayes_pls_golite062009 |
| ciliary neurotrophic factor receptor activity | 1.07748328484506 | bayes_pls_golite062009 |
| cell surface binding | 1.05599555585797 | bayes_pls_golite062009 |
| interleukin-6 binding | 0.888638861691021 | bayes_pls_golite062009 |
| interleukin-6 receptor activity | 0.888638861691021 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.703490254739121 | bayes_pls_golite062009 |
| transferase activity | 0.694193657141457 | bayes_pls_golite062009 |
| kinase binding | 0.65927255037265 | bayes_pls_golite062009 |
| oncostatin-M receptor activity | 0.628488391922279 | bayes_pls_golite062009 |
| leukemia inhibitory factor receptor activity | 0.628488391922279 | bayes_pls_golite062009 |
| extracellular matrix binding | 0.626982547776451 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.625443680166071 | bayes_pls_golite062009 |
| structural molecule activity | 0.611417906910562 | bayes_pls_golite062009 |
| protein phosphatase binding | 0.5845342946602 | bayes_pls_golite062009 |
| transcription factor activity | 0.557290274937694 | bayes_pls_golite062009 |
| phosphatase binding | 0.479382571752751 | bayes_pls_golite062009 |
| polysaccharide binding | 0.46177345987477 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.430075899423884 | bayes_pls_golite062009 |
| protein-hormone receptor activity | 0.42902267001067 | bayes_pls_golite062009 |
| glycoprotein binding | 0.41080910982871 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.40600177052491 | bayes_pls_golite062009 |
| protein kinase binding | 0.405060010394646 | bayes_pls_golite062009 |
| receptor binding | 0.319201203357304 | bayes_pls_golite062009 |
| interleukin-7 binding | 0.301052531308189 | bayes_pls_golite062009 |
| catalytic activity | 0.271811389148807 | bayes_pls_golite062009 |
| pattern binding | 0.195655028782749 | bayes_pls_golite062009 |
| actin filament binding | 0.142821832073786 | bayes_pls_golite062009 |
| transcription activator activity | 0.135753557343301 | bayes_pls_golite062009 |
| enzyme activator activity | 0.126307392530805 | bayes_pls_golite062009 |
| interleukin-2 receptor activity | 0.115337814289139 | bayes_pls_golite062009 |
| transcription factor binding | 0.075900818564989 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.0323918145169712 | bayes_pls_golite062009 |
|
Region A: Residues: [1308-1391] |
1 11 21 31 41 51
| | | | | |
1 PSDQVPAKIA SFDDTFTATF KEDAKMPCLA VGAPQPEITW KIKGVEFSAN DRMRVLPDGS 60
61 LLIKSVNRQD AGDYSCHAEN SIAK
|
| Detection Method: | |
| Confidence: | 28.154902 |
| Match: | 2v5yA |
| Description: | No description for 2v5yA was found. |
|
Region A: Residues: [1392-1595] |
1 11 21 31 41 51
| | | | | |
1 DSITHKLIVL APPQSPHVTL SATTTDALTV KLKPHEGDTA PLHGYTLHYK PEFGEWETSE 60
61 VSVDSQKHNI EGLLCGSRYQ VYATGFNNIG AGEASDILNT RTKGQKPKLP EKPRFIEVSS 120
121 NSVSLHFKAW KDGGCPMSHF VVESKKRDQI EWNQISNNVK PDNNYVVLDL EPATWYNLRI 180
181 TAHNSAGFTV AEYDFATLTV TGGT
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2ibgA |
| Description: | No description for 2ibgA was found. |
|
Region A: Residues: [1596-1821] |
1 11 21 31 41 51
| | | | | |
1 IAPSRDLPEL SAEDTIRIIL SNLNLVVPVV AALLVIIIAI IVICILRSKG NHHKDDVVYN 60
61 QTMGPGATLD KRRPDLRDEL GYIAPPNRKL PPVPGSNYNT CDRIKRGRGG LRSNHSTWDP 120
121 RRNPNLYEEL KAPPVPMHGN HYGHAHGNAE CHYRHPGMED EICPYATFHL LGFREEMDPT 180
181 KAMNFQTFPH QNGHAGPVPG HAGTMLPPGH PGHVHSRSGS QSMPRA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1822-2017] |
1 11 21 31 41 51
| | | | | |
1 NRYQRKNSQG GQSSIYTPAP EYDDPANCAE EDQYRRYTRV NSQGGSLYSG PGPEYDDPAN 60
61 CAPEEDQYGS QYGGPYGQPY DHYGSRGSMG RRSIGSARNP GNGSPEPPPP PPRNHDMSNS 120
121 SFNDSKESNE ISEAECDRDH GPRGNYGAVK RSPQPKDQRT TEEMRKLIER NETGPKQLQL 180
181 QQANGAGFTA YDTMAV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
