| Protein: | gi|119574692, gi... |
| Organism: | Homo sapiens |
| Length: | 715 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119574692, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..715] | [69..783] |
|
|
0.0 | [4..715] | [53..783] |
|
|
0.0 | [1..715] | [1..715] |
|
|
0.0 | [16..715] | [85..784] |
|
|
0.0 | [4..715] | [71..782] |
|
|
0.0 | [35..715] | [12..689] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MNSPKSKKAK KKEEPSQNDI SPKTKSLRKK KEPIEKKVVS SKTKKVTKNE EPSEEEIDAP 60
61 KPKKMKKEKE MNGETREKSP KLKNGFPHPE PDCNPSEAAS EESNSEIEQE IPVEQKE
|
| Detection Method: |  |
| Confidence: | 1.67 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [118-337] |
1 11 21 31 41 51
| | | | | |
1 GAFSNFPISE ETIKLLKGRG VTFLFPIQAK TFHHVYSGKD LIAQARTGTG KTFSFAIPLI 60
61 EKLHGELQDR KRGRAPQVLV LAPTRELANQ VSKDFSDITK KLSVACFYGG TPYGGQFERM 120
121 RNGIDILVGT PGRIKDHIQN GKLDLTKLKH VVLDEVDQML DMGFADQVEE ILSVAYKKDS 180
181 EDNPQTLLFS ATCPHWVFNV AKKYMKSTYE QVDLIGKKTQ
|
| Detection Method: | |
| Confidence: | 36.522879 |
| Match: | 2gxqA |
| Description: | No description for 2gxqA was found. |
|
Region A: Residues: [338-498] |
1 11 21 31 41 51
| | | | | |
1 KTAITVEHLA IKCHWTQRAA VIGDVIRVYS GHQGRTIIFC ETKKEAQELS QNSAIKQDAQ 60
61 SLHGDIPQKQ REITLKGFRN GSFGVLVATN VAARGLDIPE VDLVIQSSPP KDVESYIHRS 120
121 GRTGRAGRTG VCICFYQHKE EYQLVQVEQK AGIKFKRIGV P
|
| Detection Method: | |
| Confidence: | 22.09691 |
| Match: | 2hjvA |
| Description: | No description for 2hjvA was found. |
|
Region A: Residues: [499-715] |
1 11 21 31 41 51
| | | | | |
1 SATEIIKASS KDAIRLLDSV PPTAISHFKQ SAEKLIEEKG AVEALAAALA HISGATSVDQ 60
61 RSLINSNVGF VTMILQCSIE MPNISYAWKE LKEQLGEEID SKVKGMVFLK GKLGVCFDVP 120
121 TASVTEIQEK WHDSRRWQLS VATEQPELEG PREGYGGFRG QREGSRGFRG QRDGNRRFRG 180
181 QREGSRGPRG QRSGGGNKSN RSQNKGQKRS FSKAFGQ
|
| Detection Method: | |
| Confidence: | 3.21 |
| Match: | 2e29A |
| Description: | No description for 2e29A was found. |
| Term | Confidence | Notes |
| translation initiation factor activity | 8.25448175613623 | bayes_pls_golite062009 |
| 6.40066880991253 | bayes_pls_golite062009 | |
| RNA binding | 6.32219487559982 | bayes_pls_golite062009 |
| translation regulator activity | 4.90183970829236 | bayes_pls_golite062009 |
| mRNA binding | 4.87640532914983 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 4.72415388070659 | bayes_pls_golite062009 |
| nucleic acid binding | 4.65259034341669 | bayes_pls_golite062009 |
| structural molecule activity | 4.2958490777925 | bayes_pls_golite062009 |
| RNA cap binding | 4.1452868296365 | bayes_pls_golite062009 |
| binding | 3.48033873254013 | bayes_pls_golite062009 |
| telomeric DNA binding | 3.14144520000442 | bayes_pls_golite062009 |
| snRNA binding | 2.99850361909067 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 2.7133834347239 | bayes_pls_golite062009 |
| single-stranded RNA binding | 2.55628738360472 | bayes_pls_golite062009 |
| transcription regulator activity | 2.2045206027152 | bayes_pls_golite062009 |
| DNA binding | 1.99030664201171 | bayes_pls_golite062009 |
| U1 snRNA binding | 1.97699928565988 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.33820479438671 | bayes_pls_golite062009 |
| single-stranded DNA binding | 1.28888975042723 | bayes_pls_golite062009 |
| transcription repressor activity | 1.26023364760328 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.13517096660218 | bayes_pls_golite062009 |
| transcription factor activity | 1.09958329302628 | bayes_pls_golite062009 |
| protein binding | 1.05805521997665 | bayes_pls_golite062009 |
| mRNA 5'-UTR binding | 0.953943296217791 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 0.950588445732171 | bayes_pls_golite062009 |
| snoRNA binding | 0.749770142991192 | bayes_pls_golite062009 |
| transporter activity | 0.651859441112123 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.633093884585572 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.514515120448404 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.462558743683805 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.438822250839508 | bayes_pls_golite062009 |
| tubulin binding | 0.411965381384795 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.327072171076297 | bayes_pls_golite062009 |
| microtubule binding | 0.26848788775744 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.191850978900584 | bayes_pls_golite062009 |
| translation repressor activity, nucleic acid binding | 0.147208072406136 | bayes_pls_golite062009 |
| ligase activity | 0.115699011007988 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.105881213754909 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0694221760244125 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0607402568023739 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.0581257157312914 | bayes_pls_golite062009 |
| protein phosphatase 2B binding | 0.0244897898877268 | bayes_pls_golite062009 |
