| Protein: | FLC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 793 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..793] | [1..793] |
|
|
0.0 | [6..600] | [387..1008] |
|
|
0.0 | [6..600] | [9..630] |
|
|
0.0 | [6..601] | [8..610] |
|
Region A: Residues: [1-216] |
1 11 21 31 41 51
| | | | | |
1 MQVLVTLWCL ICTCLVLPVA AKKRTLTASS LVTCMENSQL SANSFDVSFS PDDRSLHYDL 60
61 DMTTQIDSYI YAYVDVYAYG FKIITENFDV CSMGWKQFCP VHPGNIQIDS IEYIAQKYVK 120
121 MIPGIAYQVP DIDAYVRLNI YNNVSENLAC IQVFFSNGKT VSQIGVKWVT AVIAGIGLLT 180
181 SAVLSTFGNS TAASHISANT MSLFLYFQSV AVVAMQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| voltage-gated cation channel activity | 2.66540214971227 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.66283817406605 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.65916906094646 | bayes_pls_golite062009 |
| channel activity | 2.65916906094646 | bayes_pls_golite062009 |
| cation channel activity | 2.62747969257897 | bayes_pls_golite062009 |
| potassium channel activity | 2.61371256192732 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 2.60719363833593 | bayes_pls_golite062009 |
| ion channel activity | 2.60082350471123 | bayes_pls_golite062009 |
| voltage-gated channel activity | 2.58448165457823 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 2.57450407680312 | bayes_pls_golite062009 |
| gated channel activity | 2.51455369837435 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.48447488950861 | bayes_pls_golite062009 |
| transporter activity | 2.35657262831396 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.25147059981728 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.22751878261824 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.14804562881998 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.08500207462933 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 2.07445794288256 | bayes_pls_golite062009 |
| ligand-gated channel activity | 2.07445794288256 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.02275538762334 | bayes_pls_golite062009 |
| binding | 2.01341910518392 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 1.9397436784802 | bayes_pls_golite062009 |
| hydrolase activity | 1.63153428386052 | bayes_pls_golite062009 |
| protein binding | 1.42362322632607 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0852462445742306 | bayes_pls_golite062009 |
| signal transducer activity | 0.0433671294560209 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0433671294560209 | bayes_pls_golite062009 |
|
Region A: Residues: [217-294] |
1 11 21 31 41 51
| | | | | |
1 HVDSVPPIAA AWSENLAWSM GLIRITFMQK IFRWYVEATG GSASLYLTAT TMSVLTQRGL 60
61 DYLKNTSVYK RAENVLYG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [295-601] |
1 11 21 31 41 51
| | | | | |
1 NSNTLIFRGI KRMGYRMKIE NTAIVCTGFT FFVLCGYFLA GFIMACKYSI ELCIRCGWMR 60
61 SDRFYQFRKN WRSVLKGSLL RYIYIGFTQL TILSFWEFTE RDSAGVIVIA CLFIVLSCGL 120
121 MAWAAYRTIF FASKSVEMYN NPAALLYGDE YVLNKYGFFY TMFNAKHYWW NALLTTYILV 180
181 KALFVGFAQA SGKTQALAIF IIDLAYFVAI IRYKPYLDRP TNIVNIFICT VTLVNSFLFM 240
241 FFSNLFNQKY AVSAIMGWVF FIMNAAFSLL LLLMILAFTT IILFSKNPDS RFKPAKDDRA 300
301 SFQKHAI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [602-793] |
1 11 21 31 41 51
| | | | | |
1 PHEGALNKSV ANELMALGNV AKDHTENWEY ELKSQEGKSE DNLFGVEYDD EKTGTNSENA 60
61 ESSSKETTRP TFSEKVLRSL SIKRNKSKLG SFKRSAPDKI TQQEVSPDRA SSSPNSKSYP 120
121 GVSHTRQESE ANNGLINAYE DEQFSLMEPS ILEDAASSTQ MHAMPARDLS LSSVANAQDV 180
181 TKKANILDPD YL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
