| Protein: | ELG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 791 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ELG1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..791] | [1..791] |
|
|
0.0 | [47..578] | [321..902] |
|
|
0.0 | [47..479] | [242..749] |
|
|
0.0 | [49..577] | [344..921] |
|
|
4.0E-99 | [47..609] | [319..917] |
|
|
1.0E-98 | [47..494] | [227..756] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MKRHVSLSDI LTGNKRKVRR QDALQITIDD ENDTESGTFD ARTAKHDDSS VIFLNHSVVK 60
61 PIEAVSTNHK SAKEFLMTKR TKEKCDDDDD DLIVISDKSP KSETNCSKIA LSQEHEDDIS 120
121 IISTSRIKSS LLNERASKIK NFLKHETTDT FKRLNSISKL NE
|
| Detection Method: |  |
| Confidence: | 30.0 |
| Match: | 1jbkA_ |
| Description: | ClpB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 6.27436520855727 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 6.24135351729061 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| telomeric DNA binding | 1.98044285764127 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| microtubule motor activity | 1.6537049553461 | bayes_pls_golite062009 |
| helicase activity | 1.16085745407703 | bayes_pls_golite062009 |
| motor activity | 1.14667913749579 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.720649395550746 | bayes_pls_golite062009 |
| transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
| transcription repressor activity | 0.677612020025357 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.59513742813869 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.59513742813869 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.58862275163252 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 0.295227908763532 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.26252931460003 | bayes_pls_golite062009 |
| double-stranded telomeric DNA binding | 0.19515047906201 | bayes_pls_golite062009 |
| exodeoxyribonuclease V activity | 0.185603938981231 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.147579541298736 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.113504049290503 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.111293884322157 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
|
Region A: Residues: [163-238] |
1 11 21 31 41 51
| | | | | |
1 IEPPLPLHQS IFPVGDKELS DRSVDIPLPF RTIPPLNHNF LPSDYESLKD KNSASCIPVR 60
61 YQAPVLLGTN IKRNTT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [239-302] |
1 11 21 31 41 51
| | | | | |
1 LTWPQLFKPV TLKQVLIEPK LKLRIKNWIE TSFHTLEKPT LRNRLLNRIN PNKQQGSGDE 60
61 LANF
|
|
Region B: Residues: [465-530] |
1 11 21 31 41 51
| | | | | |
1 STSTVYAFLT KYLKSLEIEV CDDWLRDVVK QNNADIRKCL MHLQFWCVDT EADLISSKNR 60
61 LPVLTS
|
| Detection Method: | |
| Confidence: | 68.0 |
| Match: | 1iqpA_ |
| Description: | Replication factor C |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [303-464] |
1 11 21 31 41 51
| | | | | |
1 IVPDLEEDEN LRPDFYRNGE ANSSLSEFVP LMILHGNSIG KKTLIQTIMR EIAGDDNSYQ 60
61 IYEVNSNMNR SKKDLLDILL DFTTTHYVKD SSKRKSDYGL VLFNDVDVLF KEHDRGYWAM 120
121 ISKLCEFSRR PLVLTCKDLS LVPSELIALA SEQNSLFHTK KI
|
|
Region B: Residues: [531-692] |
1 11 21 31 41 51
| | | | | |
1 TLGSSVKDIS QLTDLLSIND VIGQATLNRS MVRQEIDSTT MTPEKVNTFQ DQNLDDEMKL 60
61 KFDYVIDYKL HLNDPNRQPL LPFELNIYQH IQEQLEARYS YVREANHRLD NEYLVNRFKK 120
121 MTESTLNFLA SRIPKYDHLQ SARRTRNSKK ISDILNQFKG IY
|
| Detection Method: | |
| Confidence: | 68.0 |
| Match: | 1iqpA_ |
| Description: | Replication factor C |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [693-791] |
1 11 21 31 41 51
| | | | | |
1 NDETLNENAE IDLLSATTQQ IKAEINPFVF EIAKSDANVK NENKQIFELH SENVSERRYK 60
61 DLVYQLSQEG VLKNVWFNAD PSIVVRKWEH LHSGFSKNK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.840 | 0.045 | DNA replication factor C complex | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
