| Protein: | IOC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 812 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IOC2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..812] | [1..812] |
|
Region A: Residues: [1-285] |
1 11 21 31 41 51
| | | | | |
1 MRTKRTRGTR NVGASMPAGA ANADSEDWKE YVSEDIIAQL NKHQLPYSEI LDEKIADLAN 60
61 HWHFQYVMAW LSNVCESYTT TTFNTDQYGG SSTKCLWKNI KFDEGVFVTD VFSKIDGKDS 120
121 NYYNDEVDVD EGSQNLYDRI RLQLLHQLAG NKSGQLKDWN VIVNHHLQNS SAYSDLVTDL 180
181 PFLELEIARQ FDIIYSIIKL IEMKNMIFKN YLANNLHLFT FSEVILDDDN SGGEEMKSLF 240
241 ALPNVGVLVK KTIHRVKEGS SSQVSQTLNI PIKLQNCTIK ESDPD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.43368780168847 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.87245602094334 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.66824971329829 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.59870547004658 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.57961205729121 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.57748131423105 | bayes_pls_golite062009 |
| helicase activity | 1.10209416926557 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.07067040711543 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.07067040711543 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.860727914860032 | bayes_pls_golite062009 |
| hydrolase activity | 0.811278135971081 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.662855930343035 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.662855930343035 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.494751313496664 | bayes_pls_golite062009 |
| motor activity | 0.465306846212764 | bayes_pls_golite062009 |
| protein binding | 0.409258528033042 | bayes_pls_golite062009 |
| catalytic activity | 0.400036839701206 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.15435325982346 | bayes_pls_golite062009 |
| nucleotide binding | 0.153440379095025 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.130523976113733 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.130518519278213 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.0935258722285486 | bayes_pls_golite062009 |
|
Region A: Residues: [286-625] |
1 11 21 31 41 51
| | | | | |
1 IPDSVELIHL EYSHDIDAYL QSITIDYDVI TTNWGSMLEY WSENKSSKAI DEFITNLIPV 60
61 YAEHRLYSAK LLANREKERA IAELMTRRKR SSRLVAKEEE NKKKDLESEW FEKLDEREQF 120
121 IRHRNKLVSK EIKKIKDLLW NQLWQLYDQD YRDEKLTRRN ELKDRSGSGT PFFETSLGRE 180
181 EDNPLNEIDI GVLDHGPNFQ SSIIPVEPPI PGTVGPLQTG DVPELPSDFC ITKEELDELA 240
241 NYGIFTPQQE PDNQDSVFQC PGEPELAPMI ITEDTETDLF NNRPLICCDH CYRWQHWECQ 300
301 PPKIIELISS TTKSPQHTLS QRDFGVIIMG NSHGNRRSSR
|
| Detection Method: | |
| Confidence: | 7.45 |
| Match: | 1iu4A |
| Description: | Microbial transglutaminase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [626-812] |
1 11 21 31 41 51
| | | | | |
1 RPQSTLEPST KSSRPTDKRK PLSECSTFIC AWCIRDLELE LRNIFVPELK IIRAKQRKQQ 60
61 EDRERRKKMK EEKKRLEELA KKRELTESVS PPVFNNAFAN MSSSTTPSIA AYEKTNPAIN 120
121 PAPNVNAAHP IITYSQQTGS KTVPQAPQAP QTSQASIQPQ QQQQQQQQQQ PLHPKEQNFH 180
181 FQFPPTN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
