| Protein: | MLP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1679 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLP2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [269..1433] | [774..1939] |
|
|
0.0 | [259..1428] | [766..1929] |
|
|
0.0 | [269..1433] | [775..1940] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MEDKISEFLN VPFESLQGVT YPVLRKLYKK IAKFERSEEE VTKLNVLVDE IKSQYYSRIS 60
61 KLKQLLDESS EQKNTAKEEL NGLKDQLNEE RSRYRREIDA LKKQLHVSHE AMREVNDEKR 120
121 VKEEYDIWQS RDQGNDSLND DLNKENKLLR RKLMEMENIL QRCKSNAISL QLKYD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [176-268] |
1 11 21 31 41 51
| | | | | |
1 TSVQEKELML QSKKLIEEKL SSFSKKTLTE EVTKSSHVEN LEEKLYQMQS NYESVFTYNK 60
61 FLLNQNKQLS QSVEEKVLEM KNLKDTASVE KAE
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [269-692] |
1 11 21 31 41 51
| | | | | |
1 FSKEMTLQKN MNDLLRSQLT SLEKDCSLRA IEKNDDNSCR NPEHTDVIDE LIDTKLRLEK 60
61 SKNECQRLQN IVMDCTKEEE ATMTTSAVSP TVGKLFSDIK VLKRQLIKER NQKFQLQNQL 120
121 EDFILELEHK TPELISFKER TKSLEHELKR STELLETVSL TKRKQEREIT SLRQKINGCE 180
181 ANIHSLVKQR LDLARQVKLL LLNTSAIQET ASPLSQDELI SLRKILESSN IVNENDSQAI 240
241 ITERLVEFSN VNELQEKNVE LLNCIRILAD KLENYEGKQD KTLQKVENQT IKEAKDAIIE 300
301 LENINAKMET RINILLRERD SYKLLASTEE NKANTNSVTS MEAAREKKIR ELEAELSSTK 360
361 VENSAIIQNL RKELLIYKKS QCKKKTTLED FENFKGLAKE KERMLEEAID HLKAELEKQK 420
421 SWVP
|
| Detection Method: | |
| Confidence: | 48.980454 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [693-745] |
1 11 21 31 41 51
| | | | | |
1 SYIHVEKERA STELSQSRIK IKSLEYEISK LKKETASFIP TKESLTRDFE QCC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.507 | a.4.1 | Homeodomain-like |
| View | Download | 0.421 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.543 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.464 | a.4.1 | Homeodomain-like |
| View | Download | 0.368 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.352 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.346 | a.4.1 | Homeodomain-like |
| View | Download | 0.294 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.292 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.291 | a.30.1 | ROP protein |
| View | Download | 0.285 | g.59.1 | Zinc-binding domain of translation initiation factor 2 beta |
| View | Download | 0.275 | g.63.1 | Mollusk pheromone |
| View | Download | 0.251 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.204 | g.2.1 | Heat-stable enterotoxin B |
| View | Download | 0.204 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [746-1092] |
1 11 21 31 41 51
| | | | | |
1 KEKKELQMRL KESEISHNEN KMDFSSKEGQ YKAKIKELEN NLERLRSDLQ SKIQEIESIR 60
61 SCKDSQLKWA QNTIDDTEMK MKSLLTELSN KETTIEKLSS EIENLDKELR KTKFQYKFLD 120
121 QNSDASTLEP TLRKELEQIQ VQLKDANSQI QAYEEIISSN ENALIELKNE LAKTKENYDA 180
181 KIELEKKEKW AREEDLSRLR GELGEIRALQ PKLKEGALHF VQQSEKLRNE VERIQKMIEK 240
241 IEKMSTIVQL CKKKEMSQYQ STMKENKDLS ELVIRLEKDA ADCQAELTKT KSSLYSAQDL 300
301 LDKHERKWME EKADYERELI SNIEQTESLR VENSVLIEKV DDTAANN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1093-1169] |
1 11 21 31 41 51
| | | | | |
1 GDKDHLKLVS LFSNLRHERN SLETKLTTCK RELAFVKQKN DSLEKTINDL QRTQTLSEKE 60
61 YQCSAVIIDE FKDITKE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.802 | 0.005 | nuclear envelope | a.1.1 | Globin-like |
| View | Download | 0.923 | 0.005 | nuclear envelope | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.814 | 0.005 | nuclear envelope | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.847 | 0.005 | nuclear envelope | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.831 | 0.005 | nuclear envelope | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.770 | 0.005 | nuclear envelope | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.763 | 0.005 | nuclear envelope | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.751 | 0.005 | nuclear envelope | a.64.1 | Saposin |
| View | Download | 0.737 | 0.005 | nuclear envelope | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.724 | 0.005 | nuclear envelope | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.721 | 0.005 | nuclear envelope | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.713 | 0.005 | nuclear envelope | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.710 | 0.005 | nuclear envelope | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.694 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.684 | 0.005 | nuclear envelope | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.666 | 0.005 | nuclear envelope | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.662 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.656 | 0.005 | nuclear envelope | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.633 | 0.005 | nuclear envelope | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.622 | 0.005 | nuclear envelope | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.621 | 0.005 | nuclear envelope | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.605 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.591 | 0.005 | nuclear envelope | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.561 | 0.005 | nuclear envelope | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.545 | 0.005 | nuclear envelope | c.55.4 | Translational machinery components |
| View | Download | 0.532 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.531 | 0.005 | nuclear envelope | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.530 | 0.005 | nuclear envelope | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.522 | 0.005 | nuclear envelope | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.511 | 0.005 | nuclear envelope | a.112.1 | Description not found. |
| View | Download | 0.507 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.496 | 0.005 | nuclear envelope | d.203.1 | DsrC, the gamma subunit of dissimilatory sulfite reductase |
| View | Download | 0.476 | 0.005 | nuclear envelope | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.474 | 0.005 | nuclear envelope | a.17.1 | p8-MTCP1 |
| View | Download | 0.473 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.464 | 0.005 | nuclear envelope | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.459 | 0.005 | nuclear envelope | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.451 | 0.005 | nuclear envelope | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.450 | 0.005 | nuclear envelope | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.444 | 0.005 | nuclear envelope | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.442 | 0.005 | nuclear envelope | a.3.1 | Cytochrome c |
| View | Download | 0.440 | 0.005 | nuclear envelope | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.436 | 0.005 | nuclear envelope | a.39.1 | EF-hand |
| View | Download | 0.432 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.429 | 0.005 | nuclear envelope | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.422 | 0.005 | nuclear envelope | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.416 | 0.005 | nuclear envelope | a.65.1 | Annexin |
| View | Download | 0.414 | 0.005 | nuclear envelope | a.74.1 | Cyclin-like |
| View | Download | 0.408 | 0.005 | nuclear envelope | a.39.1 | EF-hand |
| View | Download | 0.405 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.405 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.387 | 0.005 | nuclear envelope | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.386 | 0.005 | nuclear envelope | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.383 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.380 | 0.005 | nuclear envelope | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.379 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.374 | 0.005 | nuclear envelope | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.374 | 0.005 | nuclear envelope | a.1.1 | Globin-like |
| View | Download | 0.371 | 0.005 | nuclear envelope | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.366 | 0.005 | nuclear envelope | a.105.1 | FIS-like |
| View | Download | 0.364 | 0.005 | nuclear envelope | a.77.1 | DEATH domain |
| View | Download | 0.355 | 0.005 | nuclear envelope | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.353 | 0.005 | nuclear envelope | a.49.1 | C-terminal domain of B transposition protein |
| View | Download | 0.349 | 0.005 | nuclear envelope | a.77.1 | DEATH domain |
| View | Download | 0.345 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.343 | 0.005 | nuclear envelope | a.74.1 | Cyclin-like |
| View | Download | 0.340 | 0.005 | nuclear envelope | a.60.1 | SAM/Pointed domain |
| View | Download | 0.337 | 0.005 | nuclear envelope | d.42.1 | POZ domain |
| View | Download | 0.332 | 0.005 | nuclear envelope | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.330 | 0.005 | nuclear envelope | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.330 | 0.005 | nuclear envelope | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.329 | 0.005 | nuclear envelope | d.53.1 | Ribosomal protein S3 C-terminal domain |
| View | Download | 0.328 | 0.005 | nuclear envelope | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.325 | 0.005 | nuclear envelope | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.324 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.322 | 0.005 | nuclear envelope | a.60.2 | RuvA domain 2-like |
| View | Download | 0.321 | 0.005 | nuclear envelope | a.46.1 | Methionine synthase domain |
| View | Download | 0.320 | 0.005 | nuclear envelope | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.315 | 0.005 | nuclear envelope | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.315 | 0.005 | nuclear envelope | a.77.1 | DEATH domain |
| View | Download | 0.310 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.310 | 0.005 | nuclear envelope | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.310 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.308 | 0.005 | nuclear envelope | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.307 | 0.005 | nuclear envelope | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.301 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.297 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.294 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.290 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.281 | 0.005 | nuclear envelope | a.158.1 | F-box domain |
| View | Download | 0.279 | 0.005 | nuclear envelope | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.278 | 0.005 | nuclear envelope | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.275 | 0.005 | nuclear envelope | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.271 | 0.005 | nuclear envelope | a.130.1 | Chorismate mutase II |
| View | Download | 0.268 | 0.005 | nuclear envelope | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.268 | 0.005 | nuclear envelope | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.265 | 0.005 | nuclear envelope | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.264 | 0.005 | nuclear envelope | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.263 | 0.005 | nuclear envelope | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.263 | 0.005 | nuclear envelope | c.9.1 | Barstar (barnase inhibitor) |
| View | Download | 0.262 | 0.005 | nuclear envelope | a.60.1 | SAM/Pointed domain |
| View | Download | 0.261 | 0.005 | nuclear envelope | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.260 | 0.005 | nuclear envelope | a.5.2 | UBA-like |
| View | Download | 0.258 | 0.005 | nuclear envelope | b.36.1 | PDZ domain-like |
| View | Download | 0.257 | 0.005 | nuclear envelope | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.257 | 0.005 | nuclear envelope | a.135.1 | Tetraspanin |
| View | Download | 0.255 | 0.005 | nuclear envelope | a.134.1 | Fungal elicitin |
| View | Download | 0.248 | 0.005 | nuclear envelope | a.47.2 | t-snare proteins |
| View | Download | 0.245 | 0.005 | nuclear envelope | d.120.1 | Cytochrome b5 |
| View | Download | 0.244 | 0.005 | nuclear envelope | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.238 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.237 | 0.005 | nuclear envelope | a.3.1 | Cytochrome c |
| View | Download | 0.237 | 0.005 | nuclear envelope | a.3.1 | Cytochrome c |
| View | Download | 0.236 | 0.005 | nuclear envelope | a.159.2 | FF domain |
| View | Download | 0.235 | 0.005 | nuclear envelope | a.74.1 | Cyclin-like |
| View | Download | 0.234 | 0.005 | nuclear envelope | d.68.4 | YhbY-like |
| View | Download | 0.230 | 0.005 | nuclear envelope | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.229 | 0.005 | nuclear envelope | a.101.1 | Uteroglobin-like |
| View | Download | 0.229 | 0.005 | nuclear envelope | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.229 | 0.005 | nuclear envelope | a.3.1 | Cytochrome c |
| View | Download | 0.227 | 0.005 | nuclear envelope | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.227 | 0.005 | nuclear envelope | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.224 | 0.005 | nuclear envelope | d.120.1 | Cytochrome b5 |
| View | Download | 0.222 | 0.005 | nuclear envelope | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.222 | 0.005 | nuclear envelope | a.24.3 | Cytochromes |
| View | Download | 0.221 | 0.005 | nuclear envelope | d.26.1 | FKBP-like |
| View | Download | 0.218 | 0.005 | nuclear envelope | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.218 | 0.005 | nuclear envelope | c.30.1 | PreATP-grasp domain |
| View | Download | 0.217 | 0.005 | nuclear envelope | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.216 | 0.005 | nuclear envelope | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.211 | 0.005 | nuclear envelope | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.209 | 0.005 | nuclear envelope | a.112.1 | Description not found. |
| View | Download | 0.204 | 0.005 | nuclear envelope | a.4.1 | Homeodomain-like |
| View | Download | 0.202 | 0.005 | nuclear envelope | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.201 | 0.005 | nuclear envelope | f.15.1 | Small-conductance potassium channel |
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| nucleic acid binding | 4.20953772435302 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.41271657675151 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.26183812259792 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.1457670954804 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| transcription activator activity | 1.77700860354597 | bayes_pls_golite062009 |
| actin binding | 1.48871115327078 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.14886080629275 | bayes_pls_golite062009 |
| chromatin binding | 0.876241359231159 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| protein binding | 0.830419844171551 | bayes_pls_golite062009 |
| molecular transducer activity | 0.515227322986114 | bayes_pls_golite062009 |
| signal transducer activity | 0.515227322986114 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.377270323657906 | bayes_pls_golite062009 |
| receptor activity | 0.361249991204582 | bayes_pls_golite062009 |
| RNA binding | 0.329588635205335 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.2679415219517 | bayes_pls_golite062009 |
| actin filament binding | 0.26311995282891 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.25931464844298 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.147724557486814 | bayes_pls_golite062009 |
|
Region A: Residues: [1170-1603] |
1 11 21 31 41 51
| | | | | |
1 VTQVNILKEN NAILQKSLKN VTEKNREIYK QLNDRQEEIS RLQRDLIQTK EQVSINSNKI 60
61 LVYESEMEQC KQRYQDLSQQ QKDAQKKDIE KLTNEISDLK GKLSSAENAN ADLENKFNRL 120
121 KKQAHEKLDA SKKQQAALTN ELNELKAIKD KLEQDLHFEN AKVIDLDTKL KAHELQSEDV 180
181 SRDHEKDTYR TLMEEIESLK KELQIFKTAN SSSDAFEKLK VNMEKEKDRI IDERTKEFEK 240
241 KLQETLNKST SSEAEYSKDI ETLKKEWLKE YEDETLRRIK EAEENLKKRI RLPSEERIQK 300
301 IISKRKEELE EEFRKKLKEN AGSLTFLDNK GSGEDAEEEL WNSPSKGNSE RPSAVAGFIN 360
361 QKNLKPQEQL KNVKNDVSFN DSQSMVTNKE NNIVDSSAAG NKAIPTFSFG KPFFSSNTSS 420
421 LQSFQNPFTA SQSN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1604-1679] |
1 11 21 31 41 51
| | | | | |
1 INTNAPLRTL NIQPEVAVKA AINFSNVTDL TNNSTDGAKI TEIGSTSKRP IESGTSSDPD 60
61 TKKVKESPAN DQASNE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.345 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.349 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.303 | a.4.1 | Homeodomain-like |
| View | Download | 0.371 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.336 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.294 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.268 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.262 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.223 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.222 | d.93.1 | SH2 domain |
| View | Download | 0.211 | d.9.1 | Interleukin 8-like chemokines |
